RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 UBXN6Q9BZV1 441 aa24.65■■□□□ 1.54
NKX2-1-201ENST00000354822 ARFGEF1Q9Y6D6 1849 aa24.65■■□□□ 1.54
NKX2-1-201ENST00000354822 NDUFB10O96000 172 aa24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 BMP3P12645 472 aa24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 MARSP56192 900 aaKnown RBP24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 HERC4Q5GLZ8 1057 aaPredicted RBP24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 PPP4R3CPQ6ZMV5 832 aa24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 TXLNBQ8N3L3 684 aa24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 ETNPPLQ8TBG4 499 aa24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 LACRTQ9GZZ8 138 aa24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 COL2A1P02458 1487 aaPredicted RBP24.64■■□□□ 1.54
NKX2-1-201ENST00000354822 POTEB3A0JP26 581 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 FRMD3A2A2Y4 597 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 POTECB2RU33 542 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 SASH3O75995 380 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 CYP11B2P19099 503 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 SREBF1P36956 1147 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 CKAP4Q07065 602 aaKnown RBP24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 SHROOM1Q2M3G4 852 aaPredicted RBP24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 CCDC40Q4G0X9 1142 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 POTEBQ6S5H4 581 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 GLIS3Q8NEA6 775 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 TANGO6Q9C0B7 1094 aa24.64■■□□□ 1.53
NKX2-1-201ENST00000354822 IKQ13123 557 aaPredicted RBP24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 KCTD17Q8N5Z5 321 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 SECISBP2LQ93073 1101 aaKnown RBP24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 DEF6Q9H4E7 631 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 ARHGAP20Q9P2F6 1191 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 GDF11O95390 407 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 KRT18P05783 430 aaKnown RBP24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 RPA1P27694 616 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 CIITAP33076 1130 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 SLC12A3P55017 1021 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 PRR16Q569H4 304 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 MSL3Q8N5Y2 521 aaKnown RBP24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 TRIM58Q8NG06 486 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 TDRD3Q9H7E2 651 aaKnown RBP24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 EMILIN3Q9NT22 766 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 FAM184BQ9ULE4 1060 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 DNM3Q9UQ16 869 aa24.63■■□□□ 1.53
NKX2-1-201ENST00000354822 RCCD1A6NED2 376 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 MED24O75448 989 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 ATP1A1P05023 1023 aaKnown RBP24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 SPIRE1Q08AE8 756 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 NCAPH2Q6IBW4 605 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 ZNF771Q7L3S4 317 aaPredicted RBP24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 RRAGAQ7L523 313 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 CACNA2D4Q7Z3S7 1137 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 SYN2Q92777 582 aaPredicted RBP24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 IFIH1Q9BYX4 1025 aaKnown RBP24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 PCDHA13Q9Y5I0 950 aa24.62■■□□□ 1.53
NKX2-1-201ENST00000354822 ENC1O14682 589 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 MAP2K7O14733 419 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 KIF11P52732 1056 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 CYP27A1Q02318 531 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 EDRF1Q3B7T1 1238 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 BEND6Q5SZJ8 279 aaPredicted RBP24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 HDXQ7Z353 690 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 BAP1Q92560 729 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 PNKPQ96T60 521 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 HERC5Q9UII4 1024 aaKnown RBP24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 TFR2Q9UP52 801 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 EPHB6O15197 1021 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 PPIP5K2O43314 1243 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 MCM3P25205 808 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 SMC1AQ14683 1233 aaKnown RBP24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 GRIPAP1Q4V328 841 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 CATSPER3Q86XQ3 398 aa24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 ZC3H3Q8IXZ2 948 aaKnown RBP24.61■■□□□ 1.53
NKX2-1-201ENST00000354822 SSU72P8A0A1W2PR75 194 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 LRRC53A6NM62 1247 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 AKR1B10O60218 316 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 TACC1O75410 805 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 GH2P01242 217 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 RHOXF2BP0C7M4 288 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 EIF4A3P38919 411 aaKnown RBP24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 WDR93Q6P2C0 686 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 PDXDC1Q6P996 788 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 SYT2Q8N9I0 419 aaPredicted RBP24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 SCFD1Q8WVM8 642 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 RHOXF2Q9BQY4 288 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 KCTD10Q9H3F6 313 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 CEP72Q9P209 647 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 JRKLQ9Y4A0 524 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 PIK3CDO00329 1044 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 ZNF263O14978 683 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 CYP3A4P08684 503 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 STAT3P40763 770 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 KCNMA1Q12791 1236 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 MAPK8IP2Q13387 824 aaPredicted RBP24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 USH1GQ495M9 461 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 ARSHQ5FYA8 562 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 LENG9Q96B70 501 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 TBC1D7Q9P0N9 293 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 HDAC6Q9UBN7 1215 aa24.6■■□□□ 1.53
NKX2-1-201ENST00000354822 C21orf2O43822 256 aa24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 PLEKP08567 350 aaPredicted RBP24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 GPS2Q13227 327 aa24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 TRIM59Q8IWR1 403 aa24.59■■□□□ 1.53
NKX2-1-201ENST00000354822 CSRNP1Q96S65 589 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 180.6 ms