RNA–Protein interactions for RNA: ENST00000351097.9

USP25-203, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 2,158 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-203ENST00000351097 SH2D4AQ9H788 454 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 TRIM21P19474 475 aaKnown RBP26.27■■□□□ 1.8
USP25-203ENST00000351097 KRT83P78385 493 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 TBC1D8BQ0IIM8 1120 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 MCTP2Q6DN12 878 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 CNNM4Q6P4Q7 775 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 ZNF662Q6ZS27 426 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 PNKPQ96T60 521 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 TRIM10Q9UDY6 481 aa26.27■■□□□ 1.8
USP25-203ENST00000351097 CNOT7Q9UIV1 285 aaKnown RBP26.27■■□□□ 1.8
USP25-203ENST00000351097 CYP3A7-CYP3A51PA0A087WV96 503 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 MAP2K7O14733 419 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 ERLIN1O75477 346 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 TFRCP02786 760 aaKnown RBP26.26■■□□□ 1.79
USP25-203ENST00000351097 CYP3A7P24462 503 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 CYP2C19P33261 490 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 HERVK_113P62684 666 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 TBC1D10BQ4KMP7 808 aaPredicted RBP26.26■■□□□ 1.79
USP25-203ENST00000351097 MBOAT7Q96N66 472 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 NUDT12Q9BQG2 462 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 ARHGAP4P98171 946 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 BLOC1S4Q9NUP1 217 aa26.26■■□□□ 1.79
USP25-203ENST00000351097 ZNHIT6Q9NWK9 470 aaKnown RBP26.26■■□□□ 1.79
USP25-203ENST00000351097 FCER1AP12319 257 aa26.25■■□□□ 1.79
USP25-203ENST00000351097 CYLC1P35663 651 aaPredicted RBP26.25■■□□□ 1.79
USP25-203ENST00000351097 MTIF2P46199 727 aaKnown RBP26.25■■□□□ 1.79
USP25-203ENST00000351097 BEND6Q5SZJ8 279 aaPredicted RBP26.25■■□□□ 1.79
USP25-203ENST00000351097 CHURC1Q8WUH1 139 aa26.25■■□□□ 1.79
USP25-203ENST00000351097 KCNMB3Q9NPA1 279 aa26.25■■□□□ 1.79
USP25-203ENST00000351097 CCDC66A2RUB6 948 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 TUBBP07437 444 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 ZBED6P86452 979 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 TAF3Q5VWG9 929 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 KRT79Q5XKE5 535 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 MOXD1Q6UVY6 613 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 SNX29Q8TEQ0 813 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 RANBP17Q9H2T7 1088 aaKnown RBP26.24■■□□□ 1.79
USP25-203ENST00000351097 PCDHA12Q9UN75 941 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 RASSF10A6NK89 507 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 SPDYE3A6NKU9 549 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 PLA2G6O60733 806 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 FOSP01100 380 aaPredicted RBP26.24■■□□□ 1.79
USP25-203ENST00000351097 CCDC122Q5T0U0 273 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 TRAPPC11Q7Z392 1133 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 EHBP1Q8NDI1 1231 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 NOC4LQ9BVI4 516 aaKnown RBP26.24■■□□□ 1.79
USP25-203ENST00000351097 AGPAT5Q9NUQ2 364 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 STK17AQ9UEE5 414 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 HACL1Q9UJ83 578 aa26.24■■□□□ 1.79
USP25-203ENST00000351097 MARCH6O60337 910 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 HOXA13P31271 388 aaPredicted RBP26.23■■□□□ 1.79
USP25-203ENST00000351097 SV2BQ7L1I2 683 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 CCDC170Q8IYT3 715 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 KIAA0895Q8NCT3 520 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 EEF2KMTQ96G04 330 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 ZKSCAN7Q9P0L1 754 aaPredicted RBP26.23■■□□□ 1.79
USP25-203ENST00000351097 ZNF541Q9H0D2 1346 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 PIK3CDO00329 1044 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 RHOXF2BP0C7M4 288 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 SREBF1P36956 1147 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 FIGNQ5HY92 759 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 MIIPQ5JXC2 388 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 HDXQ7Z353 690 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 KIAA1328Q86T90 577 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 ERGIC2Q96RQ1 377 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 RHOXF2Q9BQY4 288 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 ZNF341Q9BYN7 854 aa26.23■■□□□ 1.79
USP25-203ENST00000351097 KLK7P49862 253 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 TRAF1Q13077 416 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 CCDC174Q6PII3 467 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 CDK5RAP3Q96JB5 506 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 PCMTD1Q96MG8 357 aaPredicted RBP26.22■■□□□ 1.79
USP25-203ENST00000351097 GBP3Q9H0R5 595 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 FBXO28Q9NVF7 368 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 A0A1W2PQJ5 194 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 IPO7O95373 1038 aaKnown RBP26.22■■□□□ 1.79
USP25-203ENST00000351097 TMEM119Q4V9L6 283 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 FKBP15Q5T1M5 1219 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 NCAPH2Q6IBW4 605 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 FAM160B2Q86V87 743 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 LARP4BQ92615 738 aaKnown RBP26.22■■□□□ 1.79
USP25-203ENST00000351097 DEFB129Q9H1M3 183 aa26.22■■□□□ 1.79
USP25-203ENST00000351097 EIF3CLB5ME19 914 aaKnown RBP26.21■■□□□ 1.79
USP25-203ENST00000351097 KRT86O43790 486 aa26.21■■□□□ 1.79
USP25-203ENST00000351097 CENPPQ6IPU0 288 aa26.21■■□□□ 1.79
USP25-203ENST00000351097 MSL3Q8N5Y2 521 aaKnown RBP26.21■■□□□ 1.79
USP25-203ENST00000351097 JAKMIP2Q96AA8 810 aa26.21■■□□□ 1.79
USP25-203ENST00000351097 IQCDQ96DY2 449 aa26.21■■□□□ 1.79
USP25-203ENST00000351097 UIMC1Q96RL1 719 aa26.21■■□□□ 1.79
USP25-203ENST00000351097 EIF3CQ99613 913 aaKnown RBP26.21■■□□□ 1.79
USP25-203ENST00000351097 NHEJ1Q9H9Q4 299 aaPredicted RBP26.21■■□□□ 1.79
USP25-203ENST00000351097 FEM1BQ9UK73 627 aa26.21■■□□□ 1.79
USP25-203ENST00000351097 ERICH4A6NGS2 130 aa26.2■■□□□ 1.79
USP25-203ENST00000351097 CDK17Q00537 523 aa26.2■■□□□ 1.79
USP25-203ENST00000351097 MCM6Q14566 821 aa26.2■■□□□ 1.79
USP25-203ENST00000351097 ECM1Q16610 540 aa26.2■■□□□ 1.79
USP25-203ENST00000351097 NOA1Q8NC60 698 aaKnown RBP26.2■■□□□ 1.79
USP25-203ENST00000351097 UPF1Q92900 1129 aaKnown RBP eCLIP26.2■■□□□ 1.79
USP25-203ENST00000351097 LENG9Q96B70 501 aa26.2■■□□□ 1.79
USP25-203ENST00000351097 SEMA6BQ9H3T3 888 aa26.2■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms