RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.53
PDAP1-201ENST00000350498 F5H6K3 240 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 hCG_1984214I3L0E3 225 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 RNF40O75150 1001 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 ALDH1B1P30837 517 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 CASP5P51878 434 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 KLRC3Q07444 240 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 PRR16Q569H4 304 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 GPATCH4Q5T3I0 446 aaKnown RBP18.38■□□□□ 0.53
PDAP1-201ENST00000350498 PAPD7Q5XG87 772 aaKnown RBP18.38■□□□□ 0.53
PDAP1-201ENST00000350498 GUF1Q8N442 669 aaKnown RBP18.38■□□□□ 0.53
PDAP1-201ENST00000350498 ZNF713Q8N859 430 aaPredicted RBP18.38■□□□□ 0.53
PDAP1-201ENST00000350498 MASTLQ96GX5 879 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 ZDHHC15Q96MV8 337 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 IKZF4Q9H2S9 585 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 PSD3Q9NYI0 1048 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 SUGT1Q9Y2Z0 365 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 PVALEFA0A1B0GWK0 134 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 MATR3P43243 847 aaKnown RBP eCLIP18.38■□□□□ 0.537e-10■■■■■ 33.8
PDAP1-201ENST00000350498 IKQ13123 557 aaPredicted RBP18.38■□□□□ 0.53
PDAP1-201ENST00000350498 HSP90B2PQ58FF3 399 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 SAMD1Q6SPF0 538 aaPredicted RBP18.38■□□□□ 0.53
PDAP1-201ENST00000350498 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 SALL4Q9UJQ4 1053 aa18.38■□□□□ 0.53
PDAP1-201ENST00000350498 ZC3H4Q9UPT8 1303 aaKnown RBP18.37■□□□□ 0.53
PDAP1-201ENST00000350498 A0A1W2PRG0 241 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 MYO1CO00159 1063 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 TRAF5O00463 557 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 EIF4A3P38919 411 aaKnown RBP18.37■□□□□ 0.53
PDAP1-201ENST00000350498 ARSHQ5FYA8 562 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 COG1Q8WTW3 980 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 PRMT6Q96LA8 375 aaPredicted RBP18.37■□□□□ 0.53
PDAP1-201ENST00000350498 SCAF8Q9UPN6 1271 aaKnown RBP18.37■□□□□ 0.53
PDAP1-201ENST00000350498 FAM86B1E9PN63 330 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 FAM86B2P0C5J1 330 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 PLA2G4BP0C869 781 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 ICA1Q05084 483 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 ENOX2Q16206 610 aaKnown RBP18.37■□□□□ 0.53
PDAP1-201ENST00000350498 KIAA1755Q5JYT7 1200 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 FAM114A1Q8IWE2 563 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 TRIM34Q9BYJ4 488 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 RAB34Q9BZG1 259 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 ZNHIT6Q9NWK9 470 aaKnown RBP18.37■□□□□ 0.53
PDAP1-201ENST00000350498 HPCAL4Q9UM19 191 aa18.37■□□□□ 0.53
PDAP1-201ENST00000350498 SLX4Q8IY92 1834 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 GREB1LQ9C091 1923 aaPredicted RBP18.36■□□□□ 0.53
PDAP1-201ENST00000350498 KRT86O43790 486 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 GH2P01242 217 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 POLD1P28340 1107 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 ECE1P42892 770 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 SLC7A5Q01650 507 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 CYP4A11Q02928 519 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 DNAAF5Q86Y56 855 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 CDAN1Q8IWY9 1227 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 CCDC42Q96M95 316 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 RABEP2Q9H5N1 569 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 QSER1Q2KHR3 1735 aa18.36■□□□□ 0.53
PDAP1-201ENST00000350498 MOCS3O95396 460 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 PDE6BP35913 854 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 GGCXP38435 758 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 GFPT1Q06210 699 aaPredicted RBP18.35■□□□□ 0.53
PDAP1-201ENST00000350498 KCTD19Q17RG1 926 aaPredicted RBP18.35■□□□□ 0.53
PDAP1-201ENST00000350498 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 LEKR1Q6ZMV7 388 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 MYOCDQ8IZQ8 938 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 FAM71BQ8TC56 605 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 PCDHA2Q9Y5H9 948 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 FAM170AA1A519 330 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 EIF3CLB5ME19 914 aaKnown RBP18.35■□□□□ 0.53
PDAP1-201ENST00000350498 OPLAHO14841 1288 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 NCK2O43639 380 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 NDUFB10O96000 172 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 UBXN2AP68543 259 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 KRT83P78385 493 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.536e-17■■■■□ 22.7
PDAP1-201ENST00000350498 MAN2A1Q16706 1144 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 ZCWPW2Q504Y3 356 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 HERC4Q5GLZ8 1057 aaPredicted RBP18.35■□□□□ 0.53
PDAP1-201ENST00000350498 LRRC31Q6UY01 552 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 CATSPER3Q86XQ3 398 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 BAP1Q92560 729 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 EIF3CQ99613 913 aaKnown RBP18.35■□□□□ 0.53
PDAP1-201ENST00000350498 GBP3Q9H0R5 595 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 KCNMB3Q9NPA1 279 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
PDAP1-201ENST00000350498 CYP11B2P19099 503 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 CYLC1P35663 651 aaPredicted RBP18.34■□□□□ 0.53
PDAP1-201ENST00000350498 ORC2Q13416 577 aaPredicted RBP18.34■□□□□ 0.53
PDAP1-201ENST00000350498 COBLL1Q53SF7 1204 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 PODNQ7Z5L7 613 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 SCFD1Q8WVM8 642 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 NUP58Q9BVL2 599 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 DMGDHQ9UI17 866 aaKnown RBP18.34■□□□□ 0.53
PDAP1-201ENST00000350498 PLAGL2Q9UPG8 496 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 RRP15Q9Y3B9 282 aaKnown RBP18.34■□□□□ 0.53
PDAP1-201ENST00000350498 RSPH10B2B2RC85 870 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 ZBTB39O15060 712 aa18.34■□□□□ 0.53
PDAP1-201ENST00000350498 RSPH10BP0C881 870 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms