RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 KCNJ18B7U540 433 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 UBE2Q2LH0YL09 131 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 CETN3O15182 167 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 RAD51CO43502 376 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 E2F6O75461 281 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 GBP1P32455 592 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 PTDSS1P48651 473 aaKnown RBP11.64□□□□□ -0.55
CAPN3-203ENST00000349748 CACNA2D1P54289 1103 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 RASSF7Q02833 373 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 KCNJ12Q14500 433 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 SAFBQ15424 915 aaKnown RBP eCLIP11.64□□□□□ -0.55
CAPN3-203ENST00000349748 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 CNPY1Q3B7I2 92 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 KLHL7Q8IXQ5 586 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 SUPT20HQ8NEM7 779 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 FAM136AQ96C01 138 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
CAPN3-203ENST00000349748 NGLY1Q96IV0 654 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 GBP5Q96PP8 586 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 IWS1Q96ST2 819 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 ALG1Q9BT22 464 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 RAB17Q9H0T7 212 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
CAPN3-203ENST00000349748 CWC25Q9NXE8 425 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-203ENST00000349748 FBXL5Q9UKA1 691 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 TMEM98Q9Y2Y6 226 aa11.64□□□□□ -0.55
CAPN3-203ENST00000349748 ALS2Q96Q42 1657 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 TPBGLP0DKB5 382 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 TATP17735 454 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 RXRAP19793 462 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 MCMDC2Q4G0Z9 681 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 TCP11X2Q5H9J9 407 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 OLFML1Q6UWY5 402 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 SPATA20Q8TB22 786 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 ABTB1Q969K4 478 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 UTP4Q969X6 686 aaKnown RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 VPS54Q9P1Q0 977 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 PEX11AO75192 247 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 TMCC1O94876 653 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 CYP1A1P04798 512 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 HNRNPCP07910 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 ALOX15P16050 662 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 ACADSP16219 412 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 KCNA3P22001 575 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 CA8P35219 290 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 KLK7P49862 253 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 SESN3P58005 492 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 BNIP1Q12981 228 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 RCN2Q14257 317 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 DDB1Q16531 1140 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 MUM1Q2TAK8 710 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 SPIRE2Q8WWL2 714 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 PRMT1Q99873 361 aaKnown RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 ARPC5LQ9BPX5 153 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 DDX50Q9BQ39 737 aaKnown RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 LBHD1Q9BQE6 289 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-203ENST00000349748 TLR10Q9BXR5 811 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 NEUROG2Q9H2A3 272 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 TBC1D7Q9P0N9 293 aa11.63□□□□□ -0.55
CAPN3-203ENST00000349748 A0A0G2JS52 829 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 SEMA3EO15041 775 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 ECHS1P30084 290 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 ERVK-9P63128 1117 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 PRPF4BQ13523 1007 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 GALNTL6Q49A17 601 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 C1orf141Q5JVX7 400 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 RNF10Q8N5U6 811 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 PHKBQ93100 1093 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 FAM81BQ96LP2 452 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 BABAM1Q9NWV8 329 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 SALL4Q9UJQ4 1053 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 SART1O43290 800 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 IMMTQ16891 758 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 TSNAXIP1Q2TAA8 658 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 CFAP221Q4G0U5 840 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 AGBL2Q5U5Z8 902 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 DUS1LQ6P1R4 473 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 ASRGL1Q7L266 308 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 ZBTB8BQ8NAP8 495 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 ATXN2LQ8WWM7 1075 aaKnown RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 PTPRN2Q92932 1015 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 AZIN2Q96A70 460 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 PBKQ96KB5 322 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 VCX3BQ9H321 246 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 SH2D4AQ9H788 454 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 VCX3AQ9NNX9 186 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 INTUQ9ULD6 942 aa11.62□□□□□ -0.55
CAPN3-203ENST00000349748 BARX2Q9UMQ3 279 aaPredicted RBP11.62□□□□□ -0.55
CAPN3-203ENST00000349748 NHSL1Q5SYE7 1610 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 A0A087X0B3 334 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 PRAMEF22A3QJZ6 481 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 PRLRP16471 622 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 ZNF131P52739 623 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 HAND2P61296 217 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 IRGCQ6NXR0 463 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 ZNF365Q70YC5 407 aa11.61□□□□□ -0.55
CAPN3-203ENST00000349748 SMYD1Q8NB12 490 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms