RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TMC4Q7Z404 712 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 DISC1Q9NRI5 854 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 MAD2L2Q9UI95 211 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 XRCC4Q13426 336 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 ERGIC2Q96RQ1 377 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 NARFQ9UHQ1 456 aa20.51■□□□□ 0.87
SCARF1-202ENST00000348987 M0R2N6 131 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 BRD2P25440 801 aaKnown RBP20.5■□□□□ 0.87
SCARF1-202ENST00000348987 TM4SF1P30408 202 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 VPS72Q15906 364 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 ODF2Q5BJF6 829 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 FIGNQ5HY92 759 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 ARL6IP4Q66PJ3 421 aaKnown RBP20.5■□□□□ 0.87
SCARF1-202ENST00000348987 HEATR3Q7Z4Q2 680 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 CACNA2D3Q8IZS8 1091 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 NOC3LQ8WTT2 800 aaKnown RBP20.5■□□□□ 0.87
SCARF1-202ENST00000348987 NOX5Q96PH1 765 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 DLEC1Q9Y238 1755 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 MGRN1O60291 552 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 LCA5LO95447 670 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 HNRNPH3P31942 346 aaKnown RBP20.5■□□□□ 0.87
SCARF1-202ENST00000348987 LONP1P36776 959 aaKnown RBP20.5■□□□□ 0.87
SCARF1-202ENST00000348987 HLTFQ14527 1009 aaKnown RBP eCLIP20.5■□□□□ 0.87
SCARF1-202ENST00000348987 KCNB1Q14721 858 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 PCDHA6Q9UN73 950 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 STX8Q9UNK0 236 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 PCDHA8Q9Y5H6 950 aa20.5■□□□□ 0.87
SCARF1-202ENST00000348987 RHOBTB3O94955 611 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 CALML3P27482 149 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 HSD17B3P37058 310 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 HSPA9P38646 679 aaKnown RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 KCTD19Q17RG1 926 aaPredicted RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 USP21Q9UK80 565 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 COL5A3P25940 1745 aaPredicted RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 CCDC194A0A1B0GVG4 234 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 RAD51CO43502 376 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 RPS6KA4O75676 772 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 CCNHP51946 323 aaPredicted RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 RRAGAQ7L523 313 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 P2RX5Q93086 422 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 HVCN1Q96D96 273 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 MKNK2Q9HBH9 465 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 CNOT8Q9UFF9 292 aaKnown RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 BAIAP2L1Q9UHR4 511 aa20.49■□□□□ 0.87
SCARF1-202ENST00000348987 SAP30BPQ9UHR5 308 aaKnown RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 PACSIN2Q9UNF0 486 aaPredicted RBP20.49■□□□□ 0.87
SCARF1-202ENST00000348987 LRRC53A6NM62 1247 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 PHF20L1A8MW92 1017 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 CLSTN1O94985 981 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 FTCDO95954 541 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 SLC1A4P43007 532 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 IFFO1Q0D2I5 559 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 DTHD1Q6ZMT9 781 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 ZSCAN29Q8IWY8 852 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-202ENST00000348987 KLHL7Q8IXQ5 586 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 TGFBRAP1Q8WUH2 860 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 RAPGEF5Q92565 580 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 MMRN2Q9H8L6 949 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 PLCB1Q9NQ66 1216 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 NFIXQ14938 502 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 LACTB2Q53H82 288 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-202ENST00000348987 DGKHQ86XP1 1220 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 DHX37Q8IY37 1157 aaKnown RBP20.48■□□□□ 0.87
SCARF1-202ENST00000348987 CCDC155Q8N6L0 562 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 C3orf20Q8ND61 904 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 DHTKD1Q96HY7 919 aaPredicted RBP20.48■□□□□ 0.87
SCARF1-202ENST00000348987 NOD2Q9HC29 1040 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 RTCBQ9Y3I0 505 aaKnown RBP20.48■□□□□ 0.87
SCARF1-202ENST00000348987 IRS2Q9Y4H2 1338 aa20.48■□□□□ 0.87
SCARF1-202ENST00000348987 H0YGN5 161 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 PJA2O43164 708 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 ATP6V1G2O95670 118 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 ELF3P78545 371 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-202ENST00000348987 UAP1Q16222 522 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-202ENST00000348987 MSL1Q68DK7 614 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 CCT6BQ92526 530 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 ANKRD2Q9GZV1 360 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 RNF14Q9UBS8 474 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 NFS1Q9Y697 457 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 CNTNAP4Q9C0A0 1308 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 PALMO75781 387 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 CCNE1P24864 410 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 CTNNA1P35221 906 aaKnown RBP20.47■□□□□ 0.87
SCARF1-202ENST00000348987 ZNF844Q08AG5 666 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 HIBCHQ6NVY1 386 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-202ENST00000348987 CPLX4Q7Z7G2 160 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 KIAA1551Q9HCM1 1747 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 CASZ1Q86V15 1759 aa20.47■□□□□ 0.87
SCARF1-202ENST00000348987 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 STK4Q13043 487 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 GRM4Q14833 912 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 GKAP1Q5VSY0 366 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-202ENST00000348987 EGFL6Q8IUX8 553 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 MAPKAPK5Q8IW41 473 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 THOC1Q96FV9 657 aaKnown RBP20.46■□□□□ 0.87
SCARF1-202ENST00000348987 TAF1DQ9H5J8 278 aaPredicted RBP20.46■□□□□ 0.87
SCARF1-202ENST00000348987 ANKIB1Q9P2G1 1089 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 C5orf60A6NFR6 353 aa20.46■□□□□ 0.87
SCARF1-202ENST00000348987 DCDC2CA8MYV0 355 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms