RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 NAP1L2Q9ULW6 460 aaPredicted RBP14.3□□□□□ -0.12
SGCA-202ENST00000344627 CHD9Q3L8U1 2897 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 hCG_1642624A0A1W2PR95 340 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 CDC45O75419 566 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 RGS20O76081 388 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 ICAM3P32942 547 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 LIFRP42702 1097 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 COL9A3Q14050 684 aaPredicted RBP14.29□□□□□ -0.12
SGCA-202ENST00000344627 NEDD9Q14511 834 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 USP17L6PQ6QN14 398 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 FAM43BQ6ZT52 329 aaPredicted RBP14.29□□□□□ -0.12
SGCA-202ENST00000344627 GIMAP8Q8ND71 665 aaPredicted RBP14.29□□□□□ -0.12
SGCA-202ENST00000344627 ARNTL2Q8WYA1 636 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
SGCA-202ENST00000344627 HLA-CQ95604 372 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 NEK1Q96PY6 1258 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 CTAGE1Q96RT6 745 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 INSL6Q9Y581 213 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 GBF1Q92538 1859 aa14.29□□□□□ -0.12
SGCA-202ENST00000344627 NOP56O00567 594 aaKnown RBP14.28□□□□□ -0.12
SGCA-202ENST00000344627 LGR5O75473 907 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 AMHP03971 560 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 RPLP2P05387 115 aaKnown RBP14.28□□□□□ -0.12
SGCA-202ENST00000344627 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
SGCA-202ENST00000344627 FGD1P98174 961 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 SP2Q02086 613 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 TEX2Q8IWB9 1127 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 TCEANC2Q96MN5 208 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 TGS1Q96RS0 853 aaKnown RBP14.28□□□□□ -0.12
SGCA-202ENST00000344627 DOCK5Q9H7D0 1870 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 PSTPIP2Q9H939 334 aa14.28□□□□□ -0.12
SGCA-202ENST00000344627 ARIH1Q9Y4X5 557 aaPredicted RBP14.28□□□□□ -0.12
SGCA-202ENST00000344627 C17orf102A2RUQ5 167 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 H3BRB1 525 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 ERVK-21P61565 698 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 SP4Q02446 784 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 GPNMBQ14956 572 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 TRIM71Q2Q1W2 868 aaKnown RBP14.27□□□□□ -0.13
SGCA-202ENST00000344627 HEATR3Q7Z4Q2 680 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 SERINC5Q86VE9 423 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
SGCA-202ENST00000344627 APBB2Q92870 758 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 CDHR1Q96JP9 859 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 SENP7Q9BQF6 1050 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 TUT1Q9H6E5 874 aaKnown RBP14.27□□□□□ -0.13
SGCA-202ENST00000344627 ZNF215Q9UL58 517 aaPredicted RBP14.27□□□□□ -0.13
SGCA-202ENST00000344627 TET1Q8NFU7 2136 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 KAT6AQ92794 2004 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.13
SGCA-202ENST00000344627 FRMPD4Q14CM0 1322 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 RSPH10B2B2RC85 870 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 FIBPO43427 364 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 NBNO60934 754 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 RSPH10BP0C881 870 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 COL9A1P20849 921 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 HOXC8P31273 242 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 MRPS9P82933 396 aaKnown RBP14.26□□□□□ -0.13
SGCA-202ENST00000344627 GRB10Q13322 594 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 UBE2SQ16763 222 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 METTL7BQ6UX53 244 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 CYFIP1Q7L576 1253 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 DHX32Q7L7V1 743 aaKnown RBP14.26□□□□□ -0.13
SGCA-202ENST00000344627 TNPO1Q92973 898 aaKnown RBP14.26□□□□□ -0.13
SGCA-202ENST00000344627 INPP4AQ96PE3 977 aaPredicted RBP14.26□□□□□ -0.13
SGCA-202ENST00000344627 C16orf70Q9BSU1 422 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 BCAS3Q9H6U6 928 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 TTC28Q96AY4 2481 aa14.26□□□□□ -0.13
SGCA-202ENST00000344627 SPDYE3A6NKU9 549 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 PIK3CDO00329 1044 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 MEIS2O14770 477 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 ZBTB43O43298 467 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 ZNF200P98182 395 aaPredicted RBP14.25□□□□□ -0.13
SGCA-202ENST00000344627 KRT32Q14532 448 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 RTN1Q16799 776 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 PTPROQ16827 1216 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 PUS10Q3MIT2 529 aaKnown RBP14.25□□□□□ -0.13
SGCA-202ENST00000344627 ZNF618Q5T7W0 954 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 UTP14CQ5TAP6 766 aaKnown RBP14.25□□□□□ -0.13
SGCA-202ENST00000344627 TMTC3Q6ZXV5 915 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 NLRX1Q86UT6 975 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 RASEFQ8IZ41 740 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 SEPT8Q92599 483 aa14.25□□□□□ -0.13
SGCA-202ENST00000344627 RBM28Q9NW13 759 aaKnown RBP14.25□□□□□ -0.13
SGCA-202ENST00000344627 CHD7Q9P2D1 2997 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 SPATA31C2B4DYI2 1134 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 MAFGO15525 162 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 NEFLP07196 543 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 HTRA4P83105 476 aaPredicted RBP14.24□□□□□ -0.13
SGCA-202ENST00000344627 ADCK5Q3MIX3 580 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 PLEKHG4Q58EX7 1191 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 PCNX4Q63HM2 1172 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 TRAF7Q6Q0C0 670 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 APOA5Q6Q788 366 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 ATP6V0A1Q93050 837 aa14.24□□□□□ -0.13
SGCA-202ENST00000344627 EHMT1Q9H9B1 1298 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms