RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NOL7Q9UMY1 257 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 PCDHA7Q9UN72 937 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 CEP131Q9UPN4 1083 aa15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 TCF20Q9UGU0 1960 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-202ENST00000344114 UMODL1Q5DID0 1318 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 CYTH3O43739 400 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 IGFBP4P22692 258 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 PLA2G5P39877 138 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 NLRP5P59047 1200 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 FAM160A1Q05DH4 1040 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 NR5A1Q13285 461 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 PTPAQ15257 358 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 NPY5RQ15761 445 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 GPATCH4Q5T3I0 446 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 LRRC47Q8N1G4 583 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 DAGLBQ8NCG7 672 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 CCDC12Q8WUD4 166 aaPredicted RBP15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 MKL1Q969V6 931 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 RRP36Q96EU6 259 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 HIPK3Q9H422 1215 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 SLC28A3Q9HAS3 691 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 DACT1Q9NYF0 836 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 SEC63Q9UGP8 760 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 FEM1BQ9UK73 627 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 MTMR7Q9Y216 660 aa15.33■□□□□ 0.04
HERPUD1-202ENST00000344114 CHD7Q9P2D1 2997 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 LCTP09848 1927 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 CABYRO75952 493 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 BMP15O95972 392 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 BEX3Q00994 111 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 SLC35G1Q2M3R5 365 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 TNFRSF25Q93038 417 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 KIFC2Q96AC6 838 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 SEZ6LQ9BYH1 1024 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 RIOX1Q9H6W3 641 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 BARHL2Q9NY43 387 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 SYNPO2Q9UMS6 1093 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 GNEQ9Y223 722 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 NCOR1O75376 2440 aa15.32■□□□□ 0.04
HERPUD1-202ENST00000344114 GRIN2DO15399 1336 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 REV3LO60673 3130 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 CUTAO60888 179 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 NR1I2O75469 434 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 CNTN2Q02246 1040 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 TNFAIP2Q03169 654 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 ZNF543Q08ER8 600 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 WWC2Q6AWC2 1192 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 CXCL17Q6UXB2 119 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 RBM43Q6ZSC3 357 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 OTOP2Q7RTS6 562 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 BLIDQ8IZY5 108 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 DCAF4Q8WV16 495 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 NOC4LQ9BVI4 516 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 TNMDQ9H2S6 317 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 PCDHA4Q9UN74 947 aa15.31■□□□□ 0.04
HERPUD1-202ENST00000344114 STXBP3O00186 592 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 KINO60870 393 aaKnown RBP15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 FDX1P10109 184 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 XRCC6P12956 609 aaKnown RBP eCLIP15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 BMP1P13497 986 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 ITGA7Q13683 1181 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 RASGRP2Q7LDG7 609 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 TLK2Q86UE8 772 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 GMCL1P1Q8NEA9 526 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 PIBF1Q8WXW3 757 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 GPKOWQ92917 476 aaPredicted RBP eCLIP15.3■□□□□ 0.041e-6■■■■□ 19.7
HERPUD1-202ENST00000344114 VWCEQ96DN2 955 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 WNT8AQ9H1J5 351 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 GOLPH3LQ9H4A5 285 aa15.3■□□□□ 0.04
HERPUD1-202ENST00000344114 ESYT2A0FGR8 921 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 SOWAHBA6NEL2 793 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 B4GALT4O60513 344 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 CMA1P23946 247 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 RABGGTBP53611 331 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 CCL23P55773 120 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 AXDND1Q5T1B0 1012 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 PPP1R18Q6NYC8 613 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 HEATR3Q7Z4Q2 680 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 TSPYL2Q9H2G4 693 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 ACAD9Q9H845 621 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 A1CFQ9NQ94 594 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 PCDHA11Q9Y5I1 949 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 BDP1A6H8Y1 2624 aa15.29■□□□□ 0.04
HERPUD1-202ENST00000344114 SCN5AQ14524 2016 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 ZNF536O15090 1300 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 FAM237AA0A1B0GTK4 181 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 ASB14A6NK59 587 aa15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 POU3F3P20264 500 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-202ENST00000344114 NAPAP54920 295 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms