RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PBX4Q9BYU1 374 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 GLT8D2Q9H1C3 349 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 UBIAD1Q9Y5Z9 338 aa17.63■□□□□ 0.41
VAPA-201ENST00000340541 FIBPO43427 364 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 B4GALT4O60513 344 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 LARGE1O95461 756 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 FOSP01100 380 aaPredicted RBP17.62■□□□□ 0.41
VAPA-201ENST00000340541 ACRP10323 421 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 NEK4P51957 841 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 AKAP17AQ02040 695 aaKnown RBP17.62■□□□□ 0.41
VAPA-201ENST00000340541 ANKRD1Q15327 319 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 HSDL1Q3SXM5 330 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 DHX37Q8IY37 1157 aaKnown RBP17.62■□□□□ 0.41
VAPA-201ENST00000340541 KAT2BQ92831 832 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 NOC4LQ9BVI4 516 aaKnown RBP17.62■□□□□ 0.41
VAPA-201ENST00000340541 ANO3Q9BYT9 981 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 MSRAQ9UJ68 235 aa17.62■□□□□ 0.41
VAPA-201ENST00000340541 CPLX1O14810 134 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 SORBS3O60504 671 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 PFKMP08237 780 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 SREBF1P36956 1147 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 SSRP1Q08945 709 aaKnown RBP17.61■□□□□ 0.41
VAPA-201ENST00000340541 AP3B2Q13367 1082 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 TRIM22Q8IYM9 498 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 CRYGNQ8WXF5 182 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 GPRASP2Q96D09 838 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 TRPV6Q9H1D0 765 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 SLKQ9H2G2 1235 aaPredicted RBP17.61■□□□□ 0.41
VAPA-201ENST00000340541 VPS54Q9P1Q0 977 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 EYSQ5T1H1 3165 aa17.61■□□□□ 0.41
VAPA-201ENST00000340541 CDH23Q9H251 3354 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 CTDNEP1O95476 244 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 DGKDQ16760 1214 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 ME3Q16798 604 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 JAKMIP3Q5VZ66 844 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 NLRX1Q86UT6 975 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 CCDC12Q8WUD4 166 aaPredicted RBP17.6■□□□□ 0.41
VAPA-201ENST00000340541 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 SPATA33Q96N06 139 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 AIFM3Q96NN9 605 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 GAS2L1Q99501 681 aaPredicted RBP17.6■□□□□ 0.41
VAPA-201ENST00000340541 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 JADE2Q9NQC1 790 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 SH3GLB2Q9NR46 395 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 TELO2Q9Y4R8 837 aa17.6■□□□□ 0.41
VAPA-201ENST00000340541 DTNBO60941 627 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 ATP9AO75110 1047 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 DEXIO95424 95 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 KCNA2P16389 499 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 RBM25P49756 843 aaKnown RBP17.59■□□□□ 0.41
VAPA-201ENST00000340541 PTPN11Q06124 597 aaPredicted RBP17.59■□□□□ 0.41
VAPA-201ENST00000340541 NEDD9Q14511 834 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 NFRKBQ6P4R8 1299 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 CPLX2Q6PUV4 134 aaKnown RBP17.59■□□□□ 0.41
VAPA-201ENST00000340541 METTL7BQ6UX53 244 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 REXO1Q8N1G1 1221 aaKnown RBP17.59■□□□□ 0.41
VAPA-201ENST00000340541 CYP2W1Q8TAV3 490 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 SENP7Q9BQF6 1050 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 EHMT1Q9H9B1 1298 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 PRUNE2Q8WUY3 3088 aa17.59■□□□□ 0.41
VAPA-201ENST00000340541 UMODL1Q5DID0 1318 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 STK36Q9NRP7 1315 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 GRXCR1A8MXD5 290 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 HAS3O00219 553 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 PPFIA4O75335 1185 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 F2P00734 622 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 ZNF286BP0CG31 522 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 GNA11P29992 359 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 PBX2P40425 430 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 CCL23P55773 120 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 ST3GAL1Q11201 340 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 MTMR1Q13613 665 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 NPY5RQ15761 445 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 CYFIP1Q7L576 1253 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 NECAB1Q8N987 351 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 CCDC148Q8NFR7 591 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 RASGRP4Q8TDF6 673 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 GTF3C6Q969F1 213 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 MXRA8Q9BRK3 442 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 C16orf70Q9BSU1 422 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 C22orf23Q9BZE7 217 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 WNT8AQ9H1J5 351 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 MLXIPQ9HAP2 919 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 SLC28A3Q9HAS3 691 aa17.58■□□□□ 0.4
VAPA-201ENST00000340541 TRMT13Q9NUP7 481 aaKnown RBP17.58■□□□□ 0.4
VAPA-201ENST00000340541 CXXC1Q9P0U4 656 aaPredicted RBP17.58■□□□□ 0.4
VAPA-201ENST00000340541 CDKL5O76039 1030 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 RFC2P35250 354 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 CEP55Q53EZ4 464 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 OTOP2Q7RTS6 562 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 CDHR1Q96JP9 859 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 GPR20Q99678 358 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 SLC4A7Q9Y6M7 1214 aa17.57■□□□□ 0.4
VAPA-201ENST00000340541 M0R2N6 131 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 MEIS1O00470 390 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 MAFGO15525 162 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 EDIL3O43854 480 aa17.56■□□□□ 0.4
VAPA-201ENST00000340541 CYP3A4P08684 503 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms