RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 FAM228BP0C875 321 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 ACTN1P12814 892 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 CNNM4Q6P4Q7 775 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 PDXDC1Q6P996 788 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 SV2BQ7L1I2 683 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 DGKHQ86XP1 1220 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 FAM114A1Q8IWE2 563 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 LARP4BQ92615 738 aaKnown RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 TSGA10Q9BZW7 698 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 A0A087WUV0 522 aaPredicted RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 A0A1W2PQJ5 194 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 PAFAH1B1P43034 410 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 RAPGEF1Q13905 1077 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 MAN2A1Q16706 1144 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 ASTE1Q2TB18 679 aaPredicted RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 SNX29Q8TEQ0 813 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 NOC3LQ8WTT2 800 aaKnown RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 LSM14BQ9BX40 385 aaKnown RBP13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 ZMYND12Q9H0C1 365 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 SH3GLB2Q9NR46 395 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 SUFUQ9UMX1 484 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 CAPN7Q9Y6W3 813 aa13.19□□□□□ -0.3
CCDC144CP-201ENST00000340196 PLSCR1O15162 318 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 PCP11498 1178 aaKnown RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 LRRC47Q8N1G4 583 aaKnown RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 CALML4Q96GE6 196 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 KIAA1551Q9HCM1 1747 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 SHTN1A0MZ66 631 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 TRAF5O00463 557 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 RAD51CO43502 376 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 TCP1P17987 556 aaKnown RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 HNRNPH3P31942 346 aaKnown RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 TNNI2P48788 182 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 GSCP56915 257 aaPredicted RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 NFIXQ14938 502 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 CALCRLQ16602 461 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 CCDC47Q96A33 483 aaKnown RBP13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 CDK5RAP3Q96JB5 506 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 AP1M1Q9BXS5 423 aa13.18□□□□□ -0.3
CCDC144CP-201ENST00000340196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 INPP5BP32019 993 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 HDLBPQ00341 1268 aaKnown RBP13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 CCDC40Q4G0X9 1142 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 FIGNQ5HY92 759 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 FAM83BQ5T0W9 1011 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 CFAP58Q5T655 872 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 MAATS1Q7Z4T9 603 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 REXO1Q8N1G1 1221 aaKnown RBP13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 NOX5Q96PH1 765 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 ZHX3Q9H4I2 956 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 GOLGA8KD6RF30 607 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 HNRNPH1P31943 449 aaKnown RBP13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 PRPHP41219 470 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 CDK17Q00537 523 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 SPRED3Q2MJR0 410 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 EGFL6Q8IUX8 553 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 EYA3Q99504 573 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 NEUROG2Q9H2A3 272 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 MYH1P12882 1939 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 E9PMD0 336 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 LSP1P33241 339 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 FLT3P36888 993 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 KIAA0753Q2KHM9 967 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 GPCPD1Q9NPB8 672 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 PPANQ9NQ55 473 aaKnown RBP13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 ANKIB1Q9P2G1 1089 aa13.17□□□□□ -0.3
CCDC144CP-201ENST00000340196 MYL1P05976 194 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 LDHBP07195 334 aaKnown RBP13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 CEP85LQ5SZL2 805 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 EMBQ6PCB8 327 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 UNC13DQ70J99 1090 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 IKZF4Q9H2S9 585 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 OPA1O60313 960 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 LCA5LO95447 670 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 TMOD1P28289 359 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 TM4SF1P30408 202 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 CFAP221Q4G0U5 840 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 SOGA3Q5TF21 947 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 NAA35Q5VZE5 725 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 KRT25Q7Z3Z0 450 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 IQCKQ8N0W5 287 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 C6orf50Q9HD87 102 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 PLAAQ9Y263 795 aa13.16□□□□□ -0.3
CCDC144CP-201ENST00000340196 GRID2IPA4D2P6 1211 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 KCNK3O14649 394 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 GYS1P13807 737 aa13.15□□□□□ -0.3
CCDC144CP-201ENST00000340196 SLC16A2P36021 539 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms