RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 ITGA7Q13683 1181 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 ISLR2Q6UXK2 745 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 WDR66Q8TBY9 1149 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 SPATA16Q9BXB7 569 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 CCDC113Q9H0I3 377 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 AGPAT5Q9NUQ2 364 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 CPSF1Q10570 1443 aaKnown RBP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 CEP170BQ9Y4F5 1589 aaPredicted RBP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 ZNF263O14978 683 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 P4HA2O15460 535 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 ACADSP16219 412 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 SAFBQ15424 915 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 SPATA1Q5VX52 437 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 APBB1IPQ7Z5R6 666 aaPredicted RBP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 PIGWQ7Z7B1 504 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 MAP7D3Q8IWC1 876 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 RAVER1Q8IY67 606 aaKnown RBP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 RIBC1Q8N443 379 aaPredicted RBP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 FITM2Q8N6M3 262 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 STK32AQ8WU08 396 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 TEKT1Q969V4 418 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 RMDN2Q96LZ7 410 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 FGFR1OP2Q9NVK5 253 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 RMND1Q9NWS8 449 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 HMG20BQ9P0W2 317 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 VPS54Q9P1Q0 977 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 N6AMT1Q9Y5N5 214 aa10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
PTCHD4-201ENST00000339488 A0A1W2PQ67 120 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 ABLIM1O14639 778 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 NVLO15381 856 aaKnown RBP10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 PAEPP09466 180 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 SCG2P13521 617 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 ERVK-9P63128 1117 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 PTPAQ15257 358 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 ZNF554Q86TJ5 538 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 VPS37DQ86XT2 251 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 DZIP1Q86YF9 867 aaKnown RBP10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 ASAP3Q8TDY4 903 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 LENG1Q96BZ8 264 aaPredicted RBP10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 MPP4Q96JB8 637 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 RAB17Q9H0T7 212 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 MAP3K19Q56UN5 1328 aa10.52□□□□□ -0.72
PTCHD4-201ENST00000339488 OR6B1O95007 311 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 TJP3O95049 919 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 PAFAH1B1P43034 410 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 COPB1P53618 953 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 DMPKQ09013 629 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 TTLL12Q14166 644 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 ITIH4Q14624 930 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 KIAA0753Q2KHM9 967 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 CDKAL1Q5VV42 579 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 PHLDB3Q6NSJ2 640 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 IRGCQ6NXR0 463 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 SLC2A7Q6PXP3 512 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 DAAM2Q86T65 1068 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 EAF2Q96CJ1 260 aaPredicted RBP10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 PLCB1Q9NQ66 1216 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 ATP8A2Q9NTI2 1148 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 SALL4Q9UJQ4 1053 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 GMEB1Q9Y692 573 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 ADGRB1O14514 1584 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 MYH1P12882 1939 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 OVOS2A0A0G2JMS6 1433 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 OVOS2A0A0J9YW53 1432 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 OVOS2Q6IE36 1432 aa10.52□□□□□ -0.73
PTCHD4-201ENST00000339488 H7C1D1 291 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ASLP04424 464 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 CCDC166P0CW27 439 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 MYCLP1P12525 358 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 HSPA9P38646 679 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 HPCAP84074 193 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 KIF5AQ12840 1032 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 LSAMPQ13449 338 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 KRT32Q14532 448 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 SULT6B1Q6IMI4 303 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ZNF653Q96CK0 615 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 PUS3Q9BZE2 481 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 DDX18Q9NVP1 670 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 UTP6Q9NYH9 597 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 CYP39A1Q9NYL5 469 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 SUCLA2Q9P2R7 463 aaPredicted RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ATP7BP35670 1465 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ZFYVE9O95405 1425 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 FAM170AA1A519 330 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 ANO9A1A5B4 782 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 COL6A2P12110 1019 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 NEK3P51956 506 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 PHEXP78562 749 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 BNIP1Q12981 228 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 SLC4A8Q2Y0W8 1093 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 UBAP2Q5T6F2 1119 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 DHX32Q7L7V1 743 aaKnown RBP10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 IQCF2Q8IXL9 164 aa10.51□□□□□ -0.73
PTCHD4-201ENST00000339488 DTX3LQ8TDB6 740 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms