RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TCP11X2Q5H9J9 407 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 MUM1L1Q5H9M0 696 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.12■□□□□ 0.49
HPS1-202ENST00000338546 KIAA0895Q8NCT3 520 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 TEX13BQ9BXU2 312 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 JADE2Q9NQC1 790 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 RTN4Q9NQC3 1192 aaKnown RBP18.12■□□□□ 0.49
HPS1-202ENST00000338546 KCND1Q9NSA2 647 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 RNF146Q9NTX7 359 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 COL20A1Q9P218 1284 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 PYCARDQ9ULZ3 195 aa18.12■□□□□ 0.49
HPS1-202ENST00000338546 ITIH6Q6UXX5 1313 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 KCNJ18B7U540 433 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 CXCL11O14625 94 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 GRIN3BO60391 1043 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 EYA4O95677 639 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 FGFR1OPO95684 399 aaKnown RBP18.11■□□□□ 0.49
HPS1-202ENST00000338546 CYP11B2P19099 503 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 EPHX2P34913 555 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 LRMPQ12912 555 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 KCNJ12Q14500 433 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 DYMQ7RTS9 669 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 PANK4Q9NVE7 773 aa18.11■□□□□ 0.49
HPS1-202ENST00000338546 ZNF214Q9UL59 606 aaPredicted RBP18.11■□□□□ 0.49
HPS1-202ENST00000338546 SCN4AP35499 1836 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 IQCA1LA6NCM1 817 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 GLTPD2A6NH11 291 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 ADM5C9JUS6 153 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 IPO5O00410 1097 aaKnown RBP18.1■□□□□ 0.49
HPS1-202ENST00000338546 MAFGO15525 162 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 FCER1AP12319 257 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 SKILP12757 684 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 PBX1P40424 430 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 CCZ1BP86790 482 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 CCZ1P86791 482 aaPredicted RBP18.1■□□□□ 0.49
HPS1-202ENST00000338546 LRRC63Q05C16 580 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 GPBP1Q86WP2 473 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 ANKRD13AQ8IZ07 590 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 MB21D1Q8N884 522 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 PROCA1Q8NCQ7 364 aaPredicted RBP18.1■□□□□ 0.49
HPS1-202ENST00000338546 TRIM47Q96LD4 638 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 TBC1D22BQ9NU19 505 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 FZD1Q9UP38 647 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 MAPK8IP1Q9UQF2 711 aa18.1■□□□□ 0.49
HPS1-202ENST00000338546 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 POTEFA5A3E0 1075 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 POTEIP0CG38 1075 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 ARP10275 920 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 IDEP14735 1019 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 ITGB5P18084 799 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 COASYQ13057 564 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 KRT31Q15323 416 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 SNRNP48Q6IEG0 339 aaKnown RBP18.09■□□□□ 0.49
HPS1-202ENST00000338546 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 POTEEQ6S8J3 1075 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 ERO1BQ86YB8 467 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 RMDN3Q96TC7 470 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 KCND2Q9NZV8 630 aa18.09■□□□□ 0.49
HPS1-202ENST00000338546 MAGEC2Q9UBF1 373 aaPredicted RBP18.09■□□□□ 0.49
HPS1-202ENST00000338546 UNCXA6NJT0 531 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 SPDYE16A6NNV3 312 aaPredicted RBP18.08■□□□□ 0.49
HPS1-202ENST00000338546 EML1O00423 815 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 SLITRK3O94933 977 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 COPB1P53618 953 aaKnown RBP18.08■□□□□ 0.49
HPS1-202ENST00000338546 UBXN2AP68543 259 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 TMEM132BQ14DG7 1078 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 PGM5Q15124 567 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 HSP90AA4PQ58FG1 418 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 FAM26FQ5R3K3 315 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 IRF2BP1Q8IU81 584 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 CSGALNACT2Q8N6G5 542 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 CHST13Q8NET6 341 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 CDCA5Q96FF9 252 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 NACC1Q96RE7 527 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 TAAR1Q96RJ0 339 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 DUSP9Q99956 384 aaKnown RBP18.08■□□□□ 0.49
HPS1-202ENST00000338546 PDCD2LQ9BRP1 358 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 SRRTQ9BXP5 876 aaKnown RBP18.08■□□□□ 0.49
HPS1-202ENST00000338546 ACAD9Q9H845 621 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 SLC39A2Q9NP94 309 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 PXMP2Q9NR77 195 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 KCNH7Q9NS40 1196 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 HOMER2Q9NSB8 354 aa18.08■□□□□ 0.49
HPS1-202ENST00000338546 N4BP3O15049 544 aa18.08■□□□□ 0.48
HPS1-202ENST00000338546 STAM2O75886 525 aa18.08■□□□□ 0.48
HPS1-202ENST00000338546 SSBP05455 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
HPS1-202ENST00000338546 KRT18P05783 430 aaKnown RBP18.08■□□□□ 0.48
HPS1-202ENST00000338546 PMS1P54277 932 aaKnown RBP18.08■□□□□ 0.48
HPS1-202ENST00000338546 ARSHQ5FYA8 562 aa18.08■□□□□ 0.48
HPS1-202ENST00000338546 ANKRD40Q6AI12 368 aa18.08■□□□□ 0.48
HPS1-202ENST00000338546 PNMA8AQ86V59 439 aaPredicted RBP18.08■□□□□ 0.48
HPS1-202ENST00000338546 MYOCDQ8IZQ8 938 aa18.08■□□□□ 0.48
HPS1-202ENST00000338546 TMX1Q9H3N1 280 aa18.08■□□□□ 0.48
HPS1-202ENST00000338546 AGO4Q9HCK5 861 aaKnown RBP18.08■□□□□ 0.48
HPS1-202ENST00000338546 COL11A1P12107 1806 aaPredicted RBP18.08■□□□□ 0.48
HPS1-202ENST00000338546 PTPRFP10586 1907 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 LOXHD1Q8IVV2 1947 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 OTOFQ9HC10 1997 aa18.07■□□□□ 0.48
HPS1-202ENST00000338546 A0A0G2JLL6 359 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms