RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 IL31RAQ8NI17 732 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 USP26Q9BXU7 913 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 TUT1Q9H6E5 874 aaKnown RBP12.29□□□□□ -0.44
CAPN3-202ENST00000337571 LY9Q9HBG7 655 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 RTEL1Q9NZ71 1219 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 THEGQ9P2T0 379 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 TAF6LQ9Y6J9 622 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 REV3LO60673 3130 aa12.29□□□□□ -0.44
CAPN3-202ENST00000337571 MYO9BQ13459 2157 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 ABHD14A-ACY1A0A1B0GW23 586 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 C17orf102A2RUQ5 167 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 FIBPO43427 364 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 GNAT1P11488 350 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 UBA1P22314 1058 aaKnown RBP12.28□□□□□ -0.44
CAPN3-202ENST00000337571 TIE1P35590 1138 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 THPOP40225 353 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 ANTXR2P58335 489 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 SKIV2LQ15477 1246 aaKnown RBP12.28□□□□□ -0.44
CAPN3-202ENST00000337571 SLC35G1Q2M3R5 365 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 RNF20Q5VTR2 975 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 XRRA1Q6P2D8 792 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 CYFIP1Q7L576 1253 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 NLRX1Q86UT6 975 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-202ENST00000337571 ARNTL2Q8WYA1 636 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 ATP6V0A1Q93050 837 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 ANO2Q9NQ90 1003 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 SLC12A7Q9Y666 1083 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 EMSYQ7Z589 1322 aa12.28□□□□□ -0.44
CAPN3-202ENST00000337571 SLC27A2O14975 620 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-202ENST00000337571 ICAM3P32942 547 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 LIFRP42702 1097 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 WDR5P61964 334 aaKnown RBP12.27□□□□□ -0.45
CAPN3-202ENST00000337571 MRPS9P82933 396 aaKnown RBP12.27□□□□□ -0.45
CAPN3-202ENST00000337571 RBL2Q08999 1139 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 AAK1Q2M2I8 961 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 ZNF618Q5T7W0 954 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 USP17L6PQ6QN14 398 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 DHX38Q92620 1227 aaKnown RBP12.27□□□□□ -0.45
CAPN3-202ENST00000337571 CTAGE1Q96RT6 745 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 ESYT1Q9BSJ8 1104 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 C16orf70Q9BSU1 422 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 PSTPIP2Q9H939 334 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 PRDM6Q9NQX0 595 aa12.27□□□□□ -0.45
CAPN3-202ENST00000337571 ZNF215Q9UL58 517 aaPredicted RBP12.27□□□□□ -0.45
CAPN3-202ENST00000337571 RSPH10B2B2RC85 870 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 RFXAPO00287 272 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 PIK3CDO00329 1044 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-202ENST00000337571 NBNO60934 754 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 CXCL10P02778 98 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 LGALS2P05162 132 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 RSPH10BP0C881 870 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-202ENST00000337571 TAP1Q03518 808 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 PCNX4Q63HM2 1172 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 METTL7BQ6UX53 244 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 SERINC5Q86VE9 423 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 SRBD1Q8N5C6 995 aaKnown RBP12.26□□□□□ -0.45
CAPN3-202ENST00000337571 GPKOWQ92917 476 aaPredicted RBP eCLIP12.26□□□□□ -0.45
CAPN3-202ENST00000337571 CDHR1Q96JP9 859 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 INPP4AQ96PE3 977 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-202ENST00000337571 RAD9AQ99638 391 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 SENP7Q9BQF6 1050 aa12.26□□□□□ -0.45
CAPN3-202ENST00000337571 LSG1Q9H089 658 aaKnown RBP12.26□□□□□ -0.45
CAPN3-202ENST00000337571 XIRP2A4UGR9 3374 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 SPDYE3A6NKU9 549 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 TTLL13PA6NNM8 815 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 LGR5O75473 907 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 PLEKHA8P1O95397 391 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 AMHP03971 560 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 SMIM10L2AP0DMW4 78 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 SMIM10L2BP0DMW5 78 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 POU3F3P20264 500 aaPredicted RBP12.25□□□□□ -0.45
CAPN3-202ENST00000337571 GPNMBQ14956 572 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 NECTIN1Q15223 517 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 UTP14CQ5TAP6 766 aaKnown RBP12.25□□□□□ -0.45
CAPN3-202ENST00000337571 CMTR1Q8N1G2 835 aaKnown RBP12.25□□□□□ -0.45
CAPN3-202ENST00000337571 FANCBQ8NB91 859 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 GPR20Q99678 358 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 RNPEPQ9H4A4 650 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 EHMT1Q9H9B1 1298 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 MTCH2Q9Y6C9 303 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 FRMPD4Q14CM0 1322 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 TET1Q8NFU7 2136 aa12.25□□□□□ -0.45
CAPN3-202ENST00000337571 MEIS2O14770 477 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 GJB5O95377 273 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 RXRAP19793 462 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 SP4Q02446 784 aa12.24□□□□□ -0.45
CAPN3-202ENST00000337571 TRIM71Q2Q1W2 868 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms