RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 TBC1D5Q92609 795 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 MIEF2Q96C03 454 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 STK17AQ9UEE5 414 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 KIAA1024Q9UPX6 916 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 LRP5O75197 1615 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP8P40818 1118 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 GTF2IP78347 998 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 EHHADHQ08426 723 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 GRAPQ13588 217 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 HLTFQ14527 1009 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 TRAPPC3LQ5T215 181 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 GUF1Q8N442 669 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 GRAPLQ8TC17 118 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 ADAMTS1Q9UHI8 967 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 PLCG2P16885 1265 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 ATP1A2P50993 1020 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 FKBP3Q00688 224 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 CFAP221Q4G0U5 840 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 KCTD1Q719H9 257 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 RAD54LQ92698 747 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 PNMA5Q96PV4 448 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 LRRC27Q9C0I9 530 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 GGA1Q9UJY5 639 aa18.18■□□□□ 0.5
CDC42EP4-201ENST00000335793 E9PMD0 336 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 INPP5BP32019 993 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 KIAA0753Q2KHM9 967 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 TAF4BQ92750 862 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 SPAG5Q96R06 1193 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 BCORQ6W2J9 1755 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 PVALEFA0A1B0GWK0 134 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 ELF1P32519 619 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 GUCY2DQ02846 1103 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 LRRC63Q05C16 580 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 TTBK2Q6IQ55 1244 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 KLHL7Q8IXQ5 586 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 BCAS4Q8TDM0 211 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 RTFDC1Q9BY42 306 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 COL4A3BPQ9Y5P4 624 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 OPA1O60313 960 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 KLHL30Q0D2K2 578 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 C16orf86Q6ZW13 317 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 ZSCAN29Q8IWY8 852 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 VEZTQ9HBM0 779 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 EPB41L5Q9HCM4 733 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 STIM2Q9P246 746 aa18.17■□□□□ 0.5
CDC42EP4-201ENST00000335793 MYH10P35580 1976 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 NPHP3-ACAD11A0A0J9YXS1 232 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 EBAG9O00559 213 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 PDHBP11177 359 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 PPP4CP60510 307 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 GNGT1P63211 74 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 GPSM2P81274 684 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 FAM133AQ8N9E0 248 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 MTMR8Q96EF0 704 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 SIK3Q9Y2K2 1263 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 RPSAP08865 295 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 MRPL12P52815 198 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 FIGNQ5HY92 759 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 SALL4Q9UJQ4 1053 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 NFU1Q9UMS0 254 aa18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.16■□□□□ 0.5
CDC42EP4-201ENST00000335793 PALMO75781 387 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 AKR1B1P15121 316 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 TM4SF1P30408 202 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 GPBP1Q86WP2 473 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 CCDC65Q8IXS2 484 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 KRT12Q99456 494 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 CAPS2Q9BXY5 557 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 IRAK4Q9NWZ3 460 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 GOLGB1Q14789 3259 aaKnown RBP18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 RBM5P52756 815 aaKnown RBP eCLIP18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 COASYQ13057 564 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 ADAM9Q13443 819 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 CFAP58Q5T655 872 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 CEP120Q8N960 986 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 IQCDQ96DY2 449 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 PSTPIP2Q9H939 334 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L15C9J2P7 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L13C9JLJ4 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L11C9JVI0 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L18D6R9N7 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L22D6RA61 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L17D6RBQ6 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L19D6RCP7 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L20D6RJB6 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L24Q0WX57 530 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 DCAF17Q5H9S7 520 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 PDXDC1Q6P996 788 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 USP17L6PQ6QN14 398 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 MAATS1Q7Z4T9 603 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 FAM107BQ9H098 131 aa18.15■□□□□ 0.5
CDC42EP4-201ENST00000335793 ODF2LQ9ULJ1 636 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms