RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 EIF3CLB5ME19 914 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 PSMD14O00487 310 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 AKR1B10O60218 316 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 OAS2P29728 719 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 MRPS25P82663 173 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 KCNMA1Q12791 1236 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 ARSHQ5FYA8 562 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 TRAPPC11Q7Z392 1133 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 DCAF4Q8WV16 495 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 MKL1Q969V6 931 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 EIF3CQ99613 913 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 IDI2Q9BXS1 227 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 KIF11P52732 1056 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 KIF5AQ12840 1032 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 COBLL1Q53SF7 1204 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 TMEM179Q6ZVK1 233 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 IFIH1Q9BYX4 1025 aaKnown RBP20.97■□□□□ 0.95
RFTN1-201ENST00000334133 PLAGL2Q9UPG8 496 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 CAPN6Q9Y6Q1 641 aa20.97■□□□□ 0.95
RFTN1-201ENST00000334133 SIPA1L1O43166 1804 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 SPDYE3A6NKU9 549 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 C21orf2O43822 256 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 MOCS3O95396 460 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 GFPT1Q06210 699 aaPredicted RBP20.96■□□□□ 0.95
RFTN1-201ENST00000334133 TATDN1Q6P1N9 297 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 CDAN1Q8IWY9 1227 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 SCFD1Q8WVM8 642 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 GDAP1L1Q96MZ0 367 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 CCDC151A5D8V7 595 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 KIAA1755Q5JYT7 1200 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 SYDE2Q5VT97 1194 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 ACER1Q8TDN7 264 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 NT5C3AQ9H0P0 336 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 COL4A3BPQ9Y5P4 624 aa20.96■□□□□ 0.95
RFTN1-201ENST00000334133 QSER1Q2KHR3 1735 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 YDJCA8MPS7 323 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 FKBP3Q00688 224 aaKnown RBP20.95■□□□□ 0.94
RFTN1-201ENST00000334133 TDRD12Q587J7 1177 aaKnown RBP20.95■□□□□ 0.94
RFTN1-201ENST00000334133 CCDC170Q8IYT3 715 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 PCDHA13Q9Y5I0 950 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 MYH10P35580 1976 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 SFI1A8K8P3 1242 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 RSPH10B2B2RC85 870 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 RSPH10BP0C881 870 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 CXCR5P32302 372 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 ZCWPW2Q504Y3 356 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 RBM26Q5T8P6 1007 aaKnown RBP20.95■□□□□ 0.94
RFTN1-201ENST00000334133 CCDC84Q86UT8 332 aaPredicted RBP20.95■□□□□ 0.94
RFTN1-201ENST00000334133 CCDC65Q8IXS2 484 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 NEK11Q8NG66 645 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 CAGE1Q8TC20 777 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 IKZF4Q9H2S9 585 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 EMILIN3Q9NT22 766 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 SMARCAL1Q9NZC9 954 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 RGL1Q9NZL6 768 aa20.95■□□□□ 0.94
RFTN1-201ENST00000334133 PDE2AO00408 941 aaPredicted RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 OPLAHO14841 1288 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 PPIP5K2O43314 1243 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 CHMP2AO43633 222 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 RAD17O75943 681 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 FGFR1OPO95684 399 aaKnown RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 BMP3P12645 472 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 DNA2P51530 1060 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 BEND6Q5SZJ8 279 aaPredicted RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 CCDC174Q6PII3 467 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 LRRC27Q9C0I9 530 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 ZNF76P36508 570 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 USP11P51784 963 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 VAV2P52735 878 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 PSMD2Q13200 908 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 ETNPPLQ8TBG4 499 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 BAP1Q92560 729 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 SECISBP2LQ93073 1101 aaKnown RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 KDM3AQ9Y4C1 1321 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 A0A1W2PQJ5 194 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 CFBP00751 764 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 POLR2FP61218 127 aaKnown RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 LENG9Q96B70 501 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 LSM14BQ9BX40 385 aaKnown RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 SALL4Q9UJQ4 1053 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 ZBTB12Q9Y330 459 aaPredicted RBP20.94■□□□□ 0.94
RFTN1-201ENST00000334133 PCDHA2Q9Y5H9 948 aa20.94■□□□□ 0.94
RFTN1-201ENST00000334133 FAM170AA1A519 330 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 H3BQF6 201 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 BUB1O43683 1085 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 SPIRE1Q08AE8 756 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 BRD3Q15059 726 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 FIGNQ5HY92 759 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 MSANTD4Q8NCY6 345 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 PDGFDQ9GZP0 370 aaPredicted RBP20.93■□□□□ 0.94
RFTN1-201ENST00000334133 EHD2Q9NZN4 543 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 GREB1LQ9C091 1923 aaPredicted RBP20.93■□□□□ 0.94
RFTN1-201ENST00000334133 ZBTB39O15060 712 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 SLC12A3P55017 1021 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 ADAM9Q13443 819 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 GSPT2Q8IYD1 628 aaKnown RBP20.93■□□□□ 0.94
RFTN1-201ENST00000334133 PDE11AQ9HCR9 933 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 SERPINA10Q9UK55 444 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 PRR12Q9ULL5 1215 aa20.93■□□□□ 0.94
RFTN1-201ENST00000334133 PLSCR1O15162 318 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms