RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
POLR1B-202ENST00000333990 MED1Q15648 1581 aaPredicted RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 IPO5O00410 1097 aaKnown RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 QARSP47897 775 aaKnown RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 PPM1FP49593 454 aaPredicted RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 PDE6CP51160 858 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 HUNKP57058 714 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 PTK2Q05397 1052 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 SYT10Q6XYQ8 523 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 TMEM39BQ9GZU3 492 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 ST7Q9NRC1 585 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 MFAP3P55082 362 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 SCYL3Q8IZE3 742 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 ATP6V0A4Q9HBG4 840 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 STK10O94804 968 aaKnown RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 COPB1P53618 953 aaKnown RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 CTTNQ14247 550 aaKnown RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 CEP55Q53EZ4 464 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 FAM83AQ86UY5 434 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC97Q96F63 343 aaPredicted RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 FTOQ9C0B1 505 aaKnown RBP eCLIP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 STMN4Q9H169 189 aaPredicted RBP12.29□□□□□ -0.44
POLR1B-202ENST00000333990 ZFYVE28Q9HCC9 887 aa12.29□□□□□ -0.44
POLR1B-202ENST00000333990 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PIK3CAP42336 1068 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 MYL7Q01449 175 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 DDR1Q08345 913 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 STAG2Q8N3U4 1231 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 ENOX1Q8TC92 643 aaKnown RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 KLRK1P26718 216 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 UNC13DQ70J99 1090 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 GPT2Q8TD30 523 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PRMT6Q96LA8 375 aaPredicted RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 EHD4Q9H223 541 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 SEL1LQ9UBV2 794 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PARP2Q9UGN5 583 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PVALEFA0A1B0GWK0 134 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PDHBP11177 359 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 MAP2K1Q02750 393 aaPredicted RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 CAPZA3Q96KX2 299 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PSMD1Q99460 953 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 IQCGQ9H095 443 aaKnown RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 KIAA1586Q9HCI6 787 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 TXNDC16Q9P2K2 825 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PRR12Q9ULL5 1215 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 AFPP02771 609 aaKnown RBP12.28□□□□□ -0.44
POLR1B-202ENST00000333990 PSMC5P62195 406 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 TYW1BQ6NUM6 668 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 CCDC114Q96M63 670 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 MED10Q9BTT4 135 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 APOL6Q9BWW8 343 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 FAM204AQ9H8W3 233 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 RWDD2AQ9UIY3 292 aa12.28□□□□□ -0.44
POLR1B-202ENST00000333990 DDIT3P35638 169 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 FKBP1AP62942 108 aaKnown RBP12.27□□□□□ -0.44
POLR1B-202ENST00000333990 SREBF2Q12772 1141 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 Q3C1V9 767 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 RESP18Q5W5W9 173 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 ZNF365Q70YC5 407 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 METTL23Q86XA0 190 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 GABPB2Q8TAK5 448 aaPredicted RBP12.27□□□□□ -0.44
POLR1B-202ENST00000333990 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 PAGE5Q96GU1 130 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 SLC4A9Q96Q91 983 aa12.27□□□□□ -0.44
POLR1B-202ENST00000333990 FEZ2Q9UHY8 353 aaPredicted RBP12.27□□□□□ -0.44
POLR1B-202ENST00000333990 SHTN1A0MZ66 631 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 H2AFZP0C0S5 128 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 FERP16591 822 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 PHKA2P46019 1235 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 MAPK6Q16659 721 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 H2AFVQ71UI9 128 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 PEX26Q7Z412 305 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 ERO1BQ86YB8 467 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 CHST13Q8NET6 341 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 C2orf40Q9H1Z8 148 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 ZNF302Q9NR11 478 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 NDC80O14777 642 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 ACTN4O43707 911 aaKnown RBP12.27□□□□□ -0.45
POLR1B-202ENST00000333990 MYL3P08590 195 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 EPHX2P34913 555 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.45
POLR1B-202ENST00000333990 EPHA7Q15375 998 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 XRRA1Q6P2D8 792 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 U2AF1L4Q8WU68 220 aaKnown RBP12.27□□□□□ -0.45
POLR1B-202ENST00000333990 DPF2Q92785 391 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 NLRP4Q96MN2 994 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 GJB4Q9NTQ9 266 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 PCDHA10Q9Y5I2 948 aa12.27□□□□□ -0.45
POLR1B-202ENST00000333990 CCL15-CCL14A0A0B4J2E2 113 aa12.26□□□□□ -0.45
POLR1B-202ENST00000333990 CLCN1P35523 988 aa12.26□□□□□ -0.45
POLR1B-202ENST00000333990 CAP2P40123 477 aa12.26□□□□□ -0.45
POLR1B-202ENST00000333990 RNASELQ05823 741 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms