RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 RASSF8Q8NHQ8 419 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 LRRC15Q8TF66 581 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 CDHR1Q96JP9 859 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 PNMA5Q96PV4 448 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 SDF4Q9BRK5 362 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
TRIM49B-201ENST00000332682 DOCK5Q9H7D0 1870 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 ZSWIM8A7E2V4 1837 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 SPATA31C2B4DYI2 1134 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 CHMP2AO43633 222 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 LETM1O95202 739 aaPredicted RBP13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 KCNA2P16389 499 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 ICAM3P32942 547 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 MAP2K2P36507 400 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 STAT6P42226 847 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 ZRSR1Q15695 479 aaKnown RBP13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 HYIQ5T013 277 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 MORN1Q5T089 497 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 RRAGBQ5VZM2 374 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 HAUS3Q68CZ6 603 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 CKAP2LQ8IYA6 745 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 ELOA2Q8IYF1 753 aaPredicted RBP13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 CALML4Q96GE6 196 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 PLIN2Q99541 437 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 UNC45AQ9H3U1 944 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 TBC1D22BQ9NU19 505 aa13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 DIS3Q9Y2L1 958 aaKnown RBP13.58□□□□□ -0.24
TRIM49B-201ENST00000332682 KDM3AQ9Y4C1 1321 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 ASB14A6NK59 587 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 DDX39AO00148 427 aaKnown RBP13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 FOXN1O15353 648 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 SLC26A4O43511 780 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 CCT6AP40227 531 aaKnown RBP13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 ECM1Q16610 540 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 TMEM119Q4V9L6 283 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 ARMCX2Q7L311 632 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 DPP9Q86TI2 863 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 GRAMD1CQ8IYS0 662 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 CEP57L1Q8IYX8 460 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 ERMNQ8TAM6 284 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 ERCC4Q92889 916 aaPredicted RBP13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 CFHR5Q9BXR6 569 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
TRIM49B-201ENST00000332682 NFASCO94856 1347 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 MED24O75448 989 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 ECM2O94769 699 aaPredicted RBP13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 RPA1P27694 616 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 CTGFP29279 349 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 MDM2Q00987 491 aaPredicted RBP13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 MAP2K5Q13163 448 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 POTEBQ6S5H4 581 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 SEPT14Q6ZU15 432 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 EEPD1Q7L9B9 569 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 PAGE5Q96GU1 130 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 CDK5RAP3Q96JB5 506 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 MAML3Q96JK9 1138 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 MTRQ99707 1265 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 EIF2AK1Q9BQI3 630 aaKnown RBP13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 CUEDC2Q9H467 287 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 STK17AQ9UEE5 414 aa13.56□□□□□ -0.24
TRIM49B-201ENST00000332682 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 TNPO2O14787 897 aaKnown RBP13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 TBC1D8O95759 1140 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 CCNE2O96020 404 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 HOXC6P09630 235 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 UBA1P22314 1058 aaKnown RBP13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 KRT76Q01546 638 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 SP2Q02086 613 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 PNOCQ13519 176 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 POSTNQ15063 836 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 MAMDC4Q6UXC1 1216 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 KCNK18Q7Z418 384 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 CATSPER3Q86XQ3 398 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 NPLOC4Q8TAT6 608 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 SOCS4Q8WXH5 440 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 USP6NLQ92738 828 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 HSD17B14Q9BPX1 270 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 FUCA2Q9BTY2 467 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 POLR3CQ9BUI4 534 aaPredicted RBP13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 NT5C3AQ9H0P0 336 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 MAGEF1Q9HAY2 307 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 BLOC1S4Q9NUP1 217 aa13.55□□□□□ -0.24
TRIM49B-201ENST00000332682 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 AFMP43652 599 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 LACTBP83111 547 aaPredicted RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 EPHA7Q15375 998 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 LRSAM1Q6UWE0 723 aa13.54□□□□□ -0.24
TRIM49B-201ENST00000332682 MIER3Q7Z3K6 550 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms