RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 TTC1Q99614 292 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 RPF1Q9H9Y2 349 aaKnown RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 TPCN1Q9ULQ1 816 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 SLC27A3Q5K4L6 730 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 PCGF5Q86SE9 256 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 NT5C1BQ96P26 610 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 FAM95CA0A1B0GW59 222 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 CREB3O43889 395 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 FTCDO95954 541 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 PLS3P13797 630 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 MXD4Q14582 209 aaPredicted RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 TCP11X2Q5H9J9 407 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 DENND3A2RUS2 1198 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 HSPD1P10809 573 aaKnown RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 ARHGDIAP52565 204 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 FBXL13Q8NEE6 735 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 CYTH2Q99418 400 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 AP1M1Q9BXS5 423 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 FAF1Q9UNN5 650 aaPredicted RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 ELMOD1Q8N336 334 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 PIGOQ8TEQ8 1089 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 CACTINQ8WUQ7 758 aaKnown RBP11.43□□□□□ -0.58
CLN8-201ENST00000331222 BCAP29Q9UHQ4 241 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 CLCA2Q9UQC9 943 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 UHRF1BP1Q6BDS2 1440 aa11.43□□□□□ -0.58
CLN8-201ENST00000331222 OCRLQ01968 901 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 CCDC85BQ15834 202 aaPredicted RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 EPS15L1Q9UBC2 864 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 HYOU1Q9Y4L1 999 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 MED23Q9ULK4 1368 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 CCDC195A0A1B0GUA6 201 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 PRKAB2O43741 272 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 SCRN1Q12765 414 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 NCLNQ969V3 563 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 SRP68Q9UHB9 627 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 TLK1Q9UKI8 766 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 ERBB3P21860 1342 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 RPRD2Q5VT52 1461 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 MSH2P43246 934 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 PLTPP55058 493 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 NME3Q13232 169 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 RAPGEF5Q92565 580 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 KIAA1468Q9P260 1216 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 LARSQ9P2J5 1176 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 ZNF215Q9UL58 517 aaPredicted RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 PPP1R9AQ9ULJ8 1098 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 ZNF608Q9ULD9 1512 aaPredicted RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 XPOTO43592 962 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 ZBTB7AO95365 584 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 TUBB4AP04350 444 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 ARL4AP40617 200 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 MECOMQ03112 1051 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 ARHGEF6Q15052 776 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 PPP6R3Q5H9R7 873 aaPredicted RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 TBCKQ8TEA7 893 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 PIGSQ96S52 555 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 SLC4A7Q9Y6M7 1214 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 KDM5AP29375 1690 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 SERPIND1P05546 499 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 NUMBP49757 651 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 DRP2Q13474 957 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 SUPT20HL1Q3ZLR7 823 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 CAPS2Q9BXY5 557 aa11.42□□□□□ -0.58
CLN8-201ENST00000331222 TLR7Q9NYK1 1049 aaKnown RBP11.42□□□□□ -0.58
CLN8-201ENST00000331222 YEATS2Q9ULM3 1422 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PASKQ96RG2 1323 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 LOC102724428A0A0B4J2F2 783 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PRPSAP2O60256 369 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PSMC2P35998 433 aaKnown RBP11.41□□□□□ -0.58
CLN8-201ENST00000331222 SIK1P57059 783 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 FASTKD5Q7L8L6 764 aaKnown RBP11.41□□□□□ -0.58
CLN8-201ENST00000331222 GOLGA5Q8TBA6 731 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 ABTB1Q969K4 478 aaPredicted RBP11.41□□□□□ -0.58
CLN8-201ENST00000331222 DNAJC24Q6P3W2 148 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 TRPC7Q9HCX4 862 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 TEX14Q8IWB6 1497 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PRPF4O43172 522 aaKnown RBP eCLIP11.41□□□□□ -0.585e-6■■■□□ 18.8
CLN8-201ENST00000331222 SERPINB2P05120 415 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 IL13P35225 146 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PEX3P56589 373 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 MYO1EQ12965 1108 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 E2F5Q15329 346 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
CLN8-201ENST00000331222 EPB41L5Q9HCM4 733 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 PPP2R2CQ9Y2T4 447 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 HEY1Q9Y5J3 304 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 DPYSL4O14531 572 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 SEC31AO94979 1220 aaKnown RBP11.41□□□□□ -0.58
CLN8-201ENST00000331222 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.41□□□□□ -0.58
CLN8-201ENST00000331222 NUDCD1Q96RS6 583 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 SMYD3Q9H7B4 428 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 FAM196BA6NMK8 535 aa11.41□□□□□ -0.58
CLN8-201ENST00000331222 UPP2O95045 317 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms