RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.34
SHMT2-201ENST00000328923 TEKT1Q969V4 418 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 CARD9Q9H257 536 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 BTG4Q9NY30 223 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 CHMP2BQ9UQN3 213 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 SLIT2O94813 1529 aa12.96□□□□□ -0.34
SHMT2-201ENST00000328923 BCL9LQ86UU0 1499 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 HIP1RO75146 1068 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 PAEPP09466 180 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 TNFRSF8P28908 595 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 GUCY2DQ02846 1103 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 IMMTQ16891 758 aaKnown RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 ANKRD13DQ6ZTN6 518 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 CCNJLQ8IV13 435 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 SPATA20Q8TB22 786 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 CHMP6Q96FZ7 201 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 ADD3Q9UEY8 706 aaKnown RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 A0A0G2JLW4 131 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 GCOM1H8Y6P7 765 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 GLI1P08151 1106 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 MYZAPP0CAP1 466 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 CCDC166P0CW27 439 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 RAD23BP54727 409 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 PPP2R2AP63151 447 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 LACTBP83111 547 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 GET4Q7L5D6 327 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 NUP88Q99567 741 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 PPP1R12CQ9BZL4 782 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 INIPQ9NRY2 104 aa12.95□□□□□ -0.34
SHMT2-201ENST00000328923 ZNHIT6Q9NWK9 470 aaKnown RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-201ENST00000328923 KCPQ6ZWJ8 1503 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 DCDC2CA8MYV0 355 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 IPO5O00410 1097 aaKnown RBP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 OXCT1P55809 520 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 KIF5AQ12840 1032 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 TMED1Q13445 227 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 KRT40Q6A162 431 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 C8orf74Q6P047 294 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 AZIN2Q96A70 460 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 KLHL29Q96CT2 875 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 PSMB7Q99436 277 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 TRAIPQ9BWF2 469 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 VCX3BQ9H321 246 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 VCX3AQ9NNX9 186 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 TOGARAM1Q9Y4F4 1720 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 CCNFP41002 786 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 PEX5P50542 639 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 PHEXP78562 749 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 DUS1LQ6P1R4 473 aaKnown RBP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 ZNF579Q8NAF0 562 aaKnown RBP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 MDM1Q8TC05 714 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 FBF1Q8TES7 1133 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 SNRNP27Q8WVK2 155 aaKnown RBP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 MYD88Q99836 296 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-201ENST00000328923 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 TSKSQ9UJT2 592 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 TRIM33Q9UPN9 1127 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 DUSP10Q9Y6W6 482 aa12.94□□□□□ -0.34
SHMT2-201ENST00000328923 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
SHMT2-201ENST00000328923 LSM1O15116 133 aaKnown RBP12.93□□□□□ -0.34
SHMT2-201ENST00000328923 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 CNPY1Q3B7I2 92 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 SPATA1Q5VX52 437 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 MREGQ8N565 214 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 LACRTQ9GZZ8 138 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 GJB4Q9NTQ9 266 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 GOLGA6L10A0A0M3HER8 536 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 MACROD2A1Z1Q3 448 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 TRIM43BA6NCK2 446 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 HOXD12P35452 270 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 KRT9P35527 623 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 CCT6AP40227 531 aaKnown RBP12.93□□□□□ -0.34
SHMT2-201ENST00000328923 STX17P56962 302 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 ANTXR2P58335 489 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 TRIM14Q14142 442 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 CDKAL1Q5VV42 579 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 ZNF365Q70YC5 407 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 SESTD1Q86VW0 696 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 PTPRN2Q92932 1015 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 XPO6Q96QU8 1125 aaKnown RBP12.93□□□□□ -0.34
SHMT2-201ENST00000328923 UBA5Q9GZZ9 404 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 EPB41L5Q9HCM4 733 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 ETNK2Q9NVF9 386 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
SHMT2-201ENST00000328923 ZFYP08048 801 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-201ENST00000328923 ACADSP16219 412 aa12.92□□□□□ -0.34
SHMT2-201ENST00000328923 CXCR5P32302 372 aa12.92□□□□□ -0.34
SHMT2-201ENST00000328923 SESN3P58005 492 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms