RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 TAAR1Q96RJ0 339 aa19.91■□□□□ 0.78
RAB39A-201ENST00000320578 RIPK3Q9Y572 518 aa19.91■□□□□ 0.78
RAB39A-201ENST00000320578 WDR90Q96KV7 1748 aa19.91■□□□□ 0.78
RAB39A-201ENST00000320578 E9PMD0 336 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 IPO5O00410 1097 aaKnown RBP19.9■□□□□ 0.78
RAB39A-201ENST00000320578 ARP10275 920 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 UBXN2AP68543 259 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 STK4Q13043 487 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 NR1I3Q14994 352 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 PGM5Q15124 567 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 DLK2Q6UY11 383 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 APTXQ7Z2E3 356 aaKnown RBP19.9■□□□□ 0.78
RAB39A-201ENST00000320578 GUF1Q8N442 669 aaKnown RBP19.9■□□□□ 0.78
RAB39A-201ENST00000320578 CHST13Q8NET6 341 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 PDCD2LQ9BRP1 358 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 THAP9Q9H5L6 903 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 ACAD9Q9H845 621 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 PXMP2Q9NR77 195 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 HOMER2Q9NSB8 354 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 LIMA1Q9UHB6 759 aaKnown RBP19.9■□□□□ 0.78
RAB39A-201ENST00000320578 FRMD3A2A2Y4 597 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 EML1O00423 815 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 IRF6O14896 467 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 MAFGO15525 162 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 CYP11B2P19099 503 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 MRPS9P82933 396 aaKnown RBP19.9■□□□□ 0.78
RAB39A-201ENST00000320578 SLC30A10Q6XR72 485 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 LRRC8AQ8IWT6 810 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 CCDC65Q8IXS2 484 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 CCDC150Q8NCX0 1101 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 P2RX5Q93086 422 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 ZNF830Q96NB3 372 aaPredicted RBP19.9■□□□□ 0.78
RAB39A-201ENST00000320578 RMDN3Q96TC7 470 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 KCNH7Q9NS40 1196 aa19.9■□□□□ 0.78
RAB39A-201ENST00000320578 EYA4O95677 639 aa19.89■□□□□ 0.77
RAB39A-201ENST00000320578 BAATQ14032 418 aaPredicted RBP19.89■□□□□ 0.77
RAB39A-201ENST00000320578 TTI2Q6NXR4 508 aa19.89■□□□□ 0.77
RAB39A-201ENST00000320578 KIAA0895Q8NCT3 520 aa19.89■□□□□ 0.77
RAB39A-201ENST00000320578 ANKRD20A12PQ8NF67 263 aa19.89■□□□□ 0.77
RAB39A-201ENST00000320578 TBC1D22BQ9NU19 505 aa19.89■□□□□ 0.77
RAB39A-201ENST00000320578 OTOFQ9HC10 1997 aa19.89■□□□□ 0.77
RAB39A-201ENST00000320578 POTEFA5A3E0 1075 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 STAM2O75886 525 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 POTEIP0CG38 1075 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 FILIP1LQ4L180 1135 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 LDLRAD1Q5T700 205 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 CENPPQ6IPU0 288 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 POTEGQ6S5H5 508 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 POTEEQ6S8J3 1075 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 NSMFQ6X4W1 530 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 DYMQ7RTS9 669 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 TMC6Q7Z403 805 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 GPBP1Q86WP2 473 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 IL31RAQ8NI17 732 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 ELP3Q9H9T3 547 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 AGO4Q9HCK5 861 aaKnown RBP19.88■□□□□ 0.77
RAB39A-201ENST00000320578 INTS13Q9NVM9 706 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 ADD3Q9UEY8 706 aaKnown RBP19.88■□□□□ 0.77
RAB39A-201ENST00000320578 FBXO40Q9UH90 709 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 LOC285556D6RIA3 1793 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 SLITRK3O94933 977 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 FCER1AP12319 257 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 EEF1GP26641 437 aaKnown RBP19.88■□□□□ 0.77
RAB39A-201ENST00000320578 ARHGEF16Q5VV41 709 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 FILIP1Q7Z7B0 1213 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 VSIG10LQ86VR7 867 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 KIAA1524Q8TCG1 905 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 NSUN6Q8TEA1 469 aaKnown RBP19.88■□□□□ 0.77
RAB39A-201ENST00000320578 CACTINQ8WUQ7 758 aaKnown RBP19.88■□□□□ 0.77
RAB39A-201ENST00000320578 UIMC1Q96RL1 719 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 PANK4Q9NVE7 773 aa19.88■□□□□ 0.77
RAB39A-201ENST00000320578 DHX15O43143 795 aaKnown RBP19.87■□□□□ 0.77
RAB39A-201ENST00000320578 CCND2P30279 289 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 COASYQ13057 564 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 TREML2Q5T2D2 321 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 RIOX2Q8IUF8 465 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 GPRASP2Q96D09 838 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 UNC45AQ9H3U1 944 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 CYP39A1Q9NYL5 469 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 PTPRFP10586 1907 aa19.87■□□□□ 0.77
RAB39A-201ENST00000320578 KIF20AO95235 890 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 IDEP14735 1019 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 MTMR1Q13613 665 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 ARSHQ5FYA8 562 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 TCP11X2Q5H9J9 407 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 FASTKD5Q7L8L6 764 aaKnown RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 CNKSR2Q8WXI2 1034 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 NACC1Q96RE7 527 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 RTN4Q9NQC3 1192 aaKnown RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 KCND2Q9NZV8 630 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 AGTPBP1Q9UPW5 1226 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 MAPK8IP1Q9UQF2 711 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 EIF2AK2P19525 551 aaKnown RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 PSMC6P62333 389 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 LRRC63Q05C16 580 aa19.86■□□□□ 0.77
RAB39A-201ENST00000320578 TBX2Q13207 712 aaPredicted RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 PABPC4Q13310 644 aaKnown RBP eCLIP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 TTLL12Q14166 644 aaPredicted RBP19.86■□□□□ 0.77
RAB39A-201ENST00000320578 EAPPQ56P03 285 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms