RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 PMS1P54277 932 aaKnown RBP19.02■□□□□ 0.64
SCAMP4-201ENST00000316097 MCTP2Q6DN12 878 aa19.02■□□□□ 0.64
SCAMP4-201ENST00000316097 CCDC70Q6NSX1 233 aa19.02■□□□□ 0.64
SCAMP4-201ENST00000316097 TMEM179Q6ZVK1 233 aa19.02■□□□□ 0.64
SCAMP4-201ENST00000316097 TMEM60Q9H2L4 133 aa19.02■□□□□ 0.64
SCAMP4-201ENST00000316097 AGPAT5Q9NUQ2 364 aa19.02■□□□□ 0.64
SCAMP4-201ENST00000316097 A0A1W2PQC6 194 aa19.02■□□□□ 0.63
SCAMP4-201ENST00000316097 MRPS25P82663 173 aaKnown RBP19.02■□□□□ 0.63
SCAMP4-201ENST00000316097 IQCEQ6IPM2 695 aa19.02■□□□□ 0.63
SCAMP4-201ENST00000316097 ZNF507Q8TCN5 953 aa19.02■□□□□ 0.63
SCAMP4-201ENST00000316097 ACER1Q8TDN7 264 aa19.02■□□□□ 0.63
SCAMP4-201ENST00000316097 NCAPGQ9BPX3 1015 aa19.02■□□□□ 0.63
SCAMP4-201ENST00000316097 ANO9A1A5B4 782 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 EIF3HO15372 352 aaKnown RBP eCLIP19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 CYP27A1Q02318 531 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 ZYXQ15942 572 aaKnown RBP19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 LETM2Q2VYF4 491 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 HDAC7Q8WUI4 952 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 NHEJ1Q9H9Q4 299 aaPredicted RBP19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 NYAP2Q9P242 653 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 GRIN2DO15399 1336 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 B4DLN1 442 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 TRIM21P19474 475 aaKnown RBP19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 MEA1Q16626 185 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 UBE2SQ16763 222 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 TBC1D10BQ4KMP7 808 aaPredicted RBP19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 KIAA1755Q5JYT7 1200 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 FBXW10Q5XX13 1052 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 ZNF662Q6ZS27 426 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 C4orf32Q8N8J7 132 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 MKL1Q969V6 931 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 VPS33BQ9H267 617 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 C6orf50Q9HD87 102 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 ZNHIT6Q9NWK9 470 aaKnown RBP19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 CD2APQ9Y5K6 639 aa19.01■□□□□ 0.63
SCAMP4-201ENST00000316097 ADSSL1Q8N142 457 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 TRIM47Q96LD4 638 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 DMGDHQ9UI17 866 aaKnown RBP19■□□□□ 0.63
SCAMP4-201ENST00000316097 SAMM50Q9Y512 469 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 LOC102724159A0A0B4J2E5 919 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 PP2D1A8MPX8 630 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 SMARCA1P28370 1054 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 KLK7P49862 253 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 PWP2Q15269 919 aaKnown RBP19■□□□□ 0.63
SCAMP4-201ENST00000316097 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
SCAMP4-201ENST00000316097 SMCR8Q8TEV9 937 aaPredicted RBP19■□□□□ 0.63
SCAMP4-201ENST00000316097 EEF2KMTQ96G04 330 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 MYCBPQ99417 103 aaPredicted RBP19■□□□□ 0.63
SCAMP4-201ENST00000316097 LRRC1Q9BTT6 524 aa19■□□□□ 0.63
SCAMP4-201ENST00000316097 MAGEC2Q9UBF1 373 aaPredicted RBP19■□□□□ 0.63
SCAMP4-201ENST00000316097 NDUFB10O96000 172 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 EEF1GP26641 437 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GMPSP49915 693 aaPredicted RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 IKQ13123 557 aaPredicted RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 DAGLBQ8NCG7 672 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 SECISBP2LQ93073 1101 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 UIMC1Q96RL1 719 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 PYM1Q9BRP8 204 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 PNMA6FA0A0J9YX94 578 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GOLGA8KD6RF30 607 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 CCNT1O60563 726 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 STAT6P42226 847 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 MATR3P43243 847 aaKnown RBP eCLIP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 KIF5AQ12840 1032 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GPATCH4Q5T3I0 446 aaKnown RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GBP6Q6ZN66 633 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 MICALL2Q8IY33 904 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GPATCH11Q8N954 259 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 TBCKQ8TEA7 893 aa18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GLIS2Q9BZE0 524 aaPredicted RBP18.99■□□□□ 0.63
SCAMP4-201ENST00000316097 GNA11P29992 359 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 INPP5BP32019 993 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 TRAPPC10P48553 1259 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 SLC7A5Q01650 507 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 CREG2Q8IUH2 290 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 DNM2P50570 870 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 RASA3Q14644 834 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 REXO1Q8N1G1 1221 aaKnown RBP18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 ZBED3Q96IU2 234 aaPredicted RBP18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 PLIN2Q99541 437 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 MYH4Q9Y623 1939 aa18.98■□□□□ 0.63
SCAMP4-201ENST00000316097 ZBTB5O15062 677 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 HNRNPH1P31943 449 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 TNIP1Q15025 636 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 QRICH1Q2TAL8 776 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 SWT1Q5T5J6 900 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 MMGT1Q8N4V1 131 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 PURBQ96QR8 312 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 TTYH3Q9C0H2 523 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 THAP9Q9H5L6 903 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 EXOC1Q9NV70 894 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 LRWD1Q9UFC0 647 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 HERC5Q9UII4 1024 aaKnown RBP18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 SNX12Q9UMY4 172 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 OPA1O60313 960 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 MNAT1P51948 309 aa18.97■□□□□ 0.63
SCAMP4-201ENST00000316097 NONOQ15233 471 aaKnown RBP eCLIP18.97■□□□□ 0.632e-6■■■□□ 18.6
SCAMP4-201ENST00000316097 KRT26Q7Z3Y9 468 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms