RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 SLITRK3O94933 977 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 ERCC5P28715 1186 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 CDC25BP30305 580 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 COASYQ13057 564 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 PDIA5Q14554 519 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 UGCGQ16739 394 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TMEM63BQ5T3F8 832 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TOGARAM2Q6ZUX3 1019 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 EEPD1Q7L9B9 569 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TC2NQ8N9U0 490 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 C7orf25Q9BPX7 421 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 REEP2Q9BRK0 252 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 ZNF577Q9BSK1 485 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 ZNF112Q9UJU3 913 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 ZNF214Q9UL59 606 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 A0A1B0GTH6 734 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 SOWAHDA6NJG2 315 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 GOLGA6L6A8MZA4 724 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 PIK3CDO00329 1044 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 CASP14P31944 242 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 SLC12A3P55017 1021 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 NAA30Q147X3 362 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TCP11X2Q5H9J9 407 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 PPP4R3BQ5MIZ7 849 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TMEM139Q8IV31 216 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 CSGALNACT2Q8N6G5 542 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 IRX2Q9BZI1 471 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 RNF146Q9NTX7 359 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 AFG3L2Q9Y4W6 797 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TISP43B9A030 160 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 IPO5O00410 1097 aaKnown RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 N4BP3O15049 544 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 EPHB6O15197 1021 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 OFD1O75665 1012 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 PSMD10O75832 226 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 Q4G0T1 1027 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 ZC2HC1CQ53FD0 456 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 PAGR1Q9BTK6 254 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 RWDD2AQ9UIY3 292 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 MRPL11Q9Y3B7 192 aaKnown RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 SPDYE16A6NNV3 312 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 RGS20O76081 388 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 GYPCP04921 128 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 MYBP10242 640 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 SFPQP23246 707 aaKnown RBP eCLIP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 TPM4P67936 248 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 HERC4Q5GLZ8 1057 aaPredicted RBP7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 SULF1Q8IWU6 871 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 REPS2Q8NFH8 660 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 RMDN3Q96TC7 470 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 SH2D4AQ9H788 454 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 PANK4Q9NVE7 773 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 BTBD7Q9P203 1132 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
LYSMD3-201ENST00000315948 GAS7O60861 476 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 PRKCSHP14314 528 aaPredicted RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 HOXD13P35453 343 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 HSD17B4P51659 736 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 FAM160B2Q86V87 743 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 APOBEC3FQ8IUX4 373 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 TXNRD2Q9NNW7 524 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 PRPF6O94906 941 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 GCFC2P16383 781 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 CIITAP33076 1130 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 COPB1P53618 953 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 COG2Q14746 738 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 GADL1Q6ZQY3 521 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 SFR1Q86XK3 245 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 DCPSQ96C86 337 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 FAM84AQ96KN4 292 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 ADARB2Q9NS39 739 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 SAMM50Q9Y512 469 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 RASSF10A6NK89 507 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 DHX15O43143 795 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 CCNE2O96020 404 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 TFRCP02786 760 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 KRT18P05783 430 aaKnown RBP7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 PGK2P07205 417 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 UBXN1Q04323 297 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 DCAF15Q66K64 600 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 PLA2G4FQ68DD2 849 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 SPECC1LQ69YQ0 1117 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 RNF207Q6ZRF8 634 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 LPAR1Q92633 364 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 P2RX5Q93086 422 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 HSD17B14Q9BPX1 270 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 GPRC5CQ9NQ84 441 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 PCDHA2Q9Y5H9 948 aa7.8□□□□□ -1.16
LYSMD3-201ENST00000315948 NMT1P30419 496 aaKnown RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 EPHX2P34913 555 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 GJA5P36382 358 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 EHHADHQ08426 723 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 TBX2Q13207 712 aaPredicted RBP7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 GIT2Q14161 759 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 PGM5Q15124 567 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 TKFCQ3LXA3 575 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 ZSWIM2Q8NEG5 633 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 SCFD1Q8WVM8 642 aa7.79□□□□□ -1.16
LYSMD3-201ENST00000315948 CDCA5Q96FF9 252 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms