RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CAMTA2O94983 1202 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 SWSAP1Q6NVH7 229 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 SRGAP1Q7Z6B7 1085 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 CTAGE3PQ8IX95 158 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 GRAMD1CQ8IYS0 662 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 PRIMPOLQ96LW4 560 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 BHMT2Q9H2M3 363 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 LMCD1Q9NZU5 365 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 SARNPP82979 210 aaKnown RBP14.71□□□□□ -0.05
RFFL-201ENST00000315249 CPLX4Q7Z7G2 160 aa14.71□□□□□ -0.05
RFFL-201ENST00000315249 A0A087WWV3 80 aa14.71□□□□□ -0.06
RFFL-201ENST00000315249 HPDP32754 393 aaPredicted RBP14.71□□□□□ -0.06
RFFL-201ENST00000315249 JAK3P52333 1124 aa14.71□□□□□ -0.06
RFFL-201ENST00000315249 OR8K1Q8NGG5 319 aa14.71□□□□□ -0.06
RFFL-201ENST00000315249 PARD3BQ8TEW8 1205 aa14.71□□□□□ -0.06
RFFL-201ENST00000315249 ZNF302Q9NR11 478 aa14.71□□□□□ -0.06
RFFL-201ENST00000315249 MAGED2Q9UNF1 606 aaPredicted RBP14.71□□□□□ -0.06
RFFL-201ENST00000315249 OR6B3Q8NGW1 331 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 CUEDC2Q9H467 287 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 IFNAR1P17181 557 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 PHLDB2Q86SQ0 1253 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 FNDC3AQ9Y2H6 1198 aaKnown RBP14.7□□□□□ -0.06
RFFL-201ENST00000315249 NEDD9Q14511 834 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 RINT1Q6NUQ1 792 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 THEM5Q8N1Q8 247 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 OSBPL3Q9H4L5 887 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 CCL15-CCL14A0A0B4J2E2 113 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 H7C0C1 242 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 KCNK3O14649 394 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 ABCD1P33897 745 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 ATP5OP48047 213 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 CCL15Q16663 113 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 ZNF280CQ8ND82 737 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 FANCLQ9NW38 375 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 RPAP1Q9BWH6 1393 aaPredicted RBP14.7□□□□□ -0.06
RFFL-201ENST00000315249 ATP5DP30049 168 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 MAPK6Q16659 721 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 STYK1Q6J9G0 422 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 SCN4BQ8IWT1 228 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 SIX6OS1Q8N1H7 587 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 MAGEF1Q9HAY2 307 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.7□□□□□ -0.062e-8■■■■■ 28.1
RFFL-201ENST00000315249 ESYT2A0FGR8 921 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 TUBB4AP04350 444 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 PNMA8AQ86V59 439 aaPredicted RBP14.7□□□□□ -0.06
RFFL-201ENST00000315249 TBC1D10CQ8IV04 446 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 PALM2Q8IXS6 379 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 ZKSCAN5Q9Y2L8 839 aa14.7□□□□□ -0.06
RFFL-201ENST00000315249 BRD1O95696 1058 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 BPIFB4P59827 614 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 MAIP1Q8WWC4 291 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 SIRT2Q8IXJ6 389 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 PCDHB6Q9Y5E3 794 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 ABCC12Q96J65 1359 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 CFAP221Q4G0U5 840 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 CYB5R4Q7L1T6 521 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 COL23A1Q86Y22 540 aaPredicted RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 VPS37BQ9H9H4 285 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.69□□□□□ -0.06
RFFL-201ENST00000315249 SUGT1Q9Y2Z0 365 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 CLDN3O15551 220 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 IVLP07476 585 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 AKR1B1P15121 316 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 LIFRP42702 1097 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 UBE2TQ9NPD8 197 aaPredicted RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 WDR64B1ANS9 1081 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 VIMP08670 466 aaKnown RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 C6orf222P0C671 652 aaPredicted RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 PHKA2P46019 1235 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 PKP1Q13835 747 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 TRMT2AQ8IZ69 625 aaKnown RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 KRT12Q99456 494 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 IRAK4Q9NWZ3 460 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 IMPACTQ9P2X3 320 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 GABBR1Q9UBS5 961 aa14.69□□□□□ -0.06
RFFL-201ENST00000315249 ZNF70Q9UC06 446 aaPredicted RBP14.69□□□□□ -0.06
RFFL-201ENST00000315249 UPP2O95045 317 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 KCNA4P22459 653 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 COG2Q14746 738 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.68□□□□□ -0.06
RFFL-201ENST00000315249 BBS5Q8N3I7 341 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 PARK7Q99497 189 aaKnown RBP14.68□□□□□ -0.06
RFFL-201ENST00000315249 TMEM39BQ9GZU3 492 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 MTFR1LQ9H019 292 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 CCDC68Q9H2F9 335 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 AFPP02771 609 aaKnown RBP14.68□□□□□ -0.06
RFFL-201ENST00000315249 PRPSAP1Q14558 356 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 MESDQ14696 234 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ZNF568Q3ZCX4 644 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ENAHQ8N8S7 591 aaPredicted RBP14.68□□□□□ -0.06
RFFL-201ENST00000315249 FAM167AQ96KS9 214 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 TUBGCP2Q9BSJ2 902 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ANAPC5Q9UJX4 755 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 SREBF2Q12772 1141 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 CAPN12Q6ZSI9 719 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 IFT20Q8IY31 132 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 ATP6V0A4Q9HBG4 840 aa14.68□□□□□ -0.06
RFFL-201ENST00000315249 POLD4Q9HCU8 107 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms