RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 USP8P40818 1118 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 KIF23Q02241 960 aaPredicted RBP8.6□□□□□ -1.03
GFM1-202ENST00000312756 METTL3Q86U44 580 aaKnown RBP8.6□□□□□ -1.03
GFM1-202ENST00000312756 TRIM42Q8IWZ5 723 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 DCAF4Q8WV16 495 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 KIFC2Q96AC6 838 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 OTUD5Q96G74 571 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 GMCL1Q96IK5 515 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 WNK4Q96J92 1243 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 YIPF2Q9BWQ6 316 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 SEZ6LQ9BYH1 1024 aa8.6□□□□□ -1.03
GFM1-202ENST00000312756 RRP15Q9Y3B9 282 aaKnown RBP8.6□□□□□ -1.03
GFM1-202ENST00000312756 STXBP3O00186 592 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 WNT7AO00755 349 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 MAP3K13O43283 966 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 GJA5P36382 358 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 GNAQP50148 359 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 QRICH1Q2TAL8 776 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 GPATCH4Q5T3I0 446 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 DIS3L2Q8IYB7 885 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 ZNF280CQ8ND82 737 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 SMC1BQ8NDV3 1235 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 HOOK2Q96ED9 719 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 GBP4Q96PP9 640 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 SENP7Q9BQF6 1050 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 PHF20Q9BVI0 1012 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 TRIM6Q9C030 488 aaPredicted RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 RSPH9Q9H1X1 276 aaPredicted RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 PRR12Q9ULL5 1215 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 RABL2BQ9UNT1 228 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 AFG3L2Q9Y4W6 797 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 FIBPO43427 364 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 CELF2O95319 508 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 ITGBL1O95965 494 aaPredicted RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 GCFC2P16383 781 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 XBP1P17861 261 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 NF2P35240 595 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 IREB2P48200 963 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 BACE1P56817 501 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 PRPF4BQ13523 1007 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 TRIM29Q14134 588 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 USH1GQ495M9 461 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 NOL9Q5SY16 702 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 TEX35Q5T0J7 233 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 SYDE2Q5VT97 1194 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 CST9Q5W186 159 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 CCDC70Q6NSX1 233 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 CCDC174Q6PII3 467 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 TTC30BQ8N4P2 665 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 RNF214Q8ND24 703 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 TMC2Q8TDI7 906 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 RRP36Q96EU6 259 aaKnown RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 PGBD1Q96JS3 809 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 KIAA1683Q9H0B3 1180 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 RPAP3Q9H6T3 665 aaPredicted RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 USP25Q9UHP3 1055 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 BARX2Q9UMQ3 279 aaPredicted RBP8.59□□□□□ -1.03
GFM1-202ENST00000312756 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 CSADQ9Y600 493 aa8.59□□□□□ -1.03
GFM1-202ENST00000312756 RLFQ13129 1914 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 COL11A1P12107 1806 aaPredicted RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 SPTLC1O15269 473 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 GADD45BO75293 160 aaPredicted RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 HARSP12081 509 aaKnown RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 GJA8P48165 433 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 STAT2P52630 851 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 NLRP5P59047 1200 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 TREML2Q5T2D2 321 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 SPIRE2Q8WWL2 714 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 TCP11Q8WWU5 503 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 WASF1Q92558 559 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 OPTNQ96CV9 577 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 MTMR8Q96EF0 704 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 BAG1Q99933 345 aaPredicted RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 TANGO6Q9C0B7 1094 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 BARHL2Q9NY43 387 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 LMCD1Q9NZU5 365 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 V9GYY5 206 aaPredicted RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 TLDC2A0PJX2 215 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 ZBTB5O15062 677 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 PRPF40AO75400 957 aaKnown RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 NAPAP54920 295 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 UBE2SQ16763 222 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 TTC30AQ86WT1 665 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 GOLGA5Q8TBA6 731 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 NEK9Q8TD19 979 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 TSC1Q92574 1164 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 USP28Q96RU2 1077 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 SH2D4AQ9H788 454 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 TMEM260Q9NX78 707 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 SEC63Q9UGP8 760 aaKnown RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 FBXO9Q9UK97 447 aaPredicted RBP8.58□□□□□ -1.04
GFM1-202ENST00000312756 CLIC4Q9Y696 253 aa8.58□□□□□ -1.04
GFM1-202ENST00000312756 PNMA6FA0A0J9YX94 578 aa8.57□□□□□ -1.04
GFM1-202ENST00000312756 SMCO2A6NFE2 343 aa8.57□□□□□ -1.04
GFM1-202ENST00000312756 LILRB3O75022 631 aa8.57□□□□□ -1.04
GFM1-202ENST00000312756 TOB1P50616 345 aaPredicted RBP8.57□□□□□ -1.04
GFM1-202ENST00000312756 ZNF445P59923 1031 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms