RNA–Protein interactions for RNA: ENST00000311180.8

PDE12-201, Transcript of phosphodiesterase 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE12, Length 8,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE12-201ENST00000311180 ZNF280CQ8ND82 737 aa13.12□□□□□ -0.31
PDE12-201ENST00000311180 DEPDC1BQ8WUY9 529 aa13.12□□□□□ -0.31
PDE12-201ENST00000311180 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
PDE12-201ENST00000311180 TBC1D22AQ8WUA7 517 aa13.12□□□□□ -0.31
PDE12-201ENST00000311180 NPC1L1Q9UHC9 1359 aa13.12□□□□□ -0.31
PDE12-201ENST00000311180 MED23Q9ULK4 1368 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 MYO1EQ12965 1108 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 TRIM67Q6ZTA4 783 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 MROH5Q6ZUA9 1318 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 VAMP4O75379 141 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 CYP2J2P51589 502 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 TMPRSS15P98073 1019 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 KPNB1Q14974 876 aaKnown RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 TNNI3KQ59H18 835 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 HDDC2Q7Z4H3 204 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 CHMP6Q96FZ7 201 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 TBC1D7Q9P0N9 293 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 PPARGC1AQ9UBK2 798 aaKnown RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 FPGT-TNNI3KV9GXZ4 949 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 PIK3CAP42336 1068 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 DAB2IPQ5VWQ8 1189 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 ABCC1P33527 1531 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 PFKFB2O60825 505 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 DDIT3P35638 169 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 MYL7Q01449 175 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 BLIDQ8IZY5 108 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 C19orf60Q96EN9 201 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 PLCH2O75038 1416 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 RASA4BC9J798 803 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 RASA4O43374 803 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 HSPA4LO95757 839 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 RUNX1T1Q06455 604 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 KIF19Q2TAC6 998 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 C16orf71Q8IYS4 520 aaPredicted RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 NCOA5Q9HCD5 579 aaKnown RBP13.11□□□□□ -0.31
PDE12-201ENST00000311180 GRID2IPA4D2P6 1211 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDE12-201ENST00000311180 LRRC63Q05C16 580 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 ITKQ08881 620 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 KAZNQ674X7 775 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 DYMQ7RTS9 669 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 SLC24A3Q9HC58 644 aa13.11□□□□□ -0.31
PDE12-201ENST00000311180 EYA2O00167 538 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 COPEO14579 308 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PARP10Q53GL7 1025 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 TRAF7Q6Q0C0 670 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 NCLNQ969V3 563 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 ANO9A1A5B4 782 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 HSPA13P48723 471 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PPP2R2AP63151 447 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PSMD2Q13200 908 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 SCYL2Q6P3W7 929 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 TTC13Q8NBP0 860 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 C19orf44Q9H6X5 657 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 NDUFA10O95299 355 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PLS3P13797 630 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 ARL4AP40617 200 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 ARHGEF11O15085 1522 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 TMEM191BP0C7N4 346 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 SRGAP2CP0DJJ0 459 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 GCFC2P16383 781 aaKnown RBP13.1□□□□□ -0.31
PDE12-201ENST00000311180 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
PDE12-201ENST00000311180 JDP2Q8WYK2 163 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 FAM83GA6ND36 823 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 GOLGA8RI6L899 631 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PIK3R2O00459 728 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 HSPA2P54652 639 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 GPCPD1Q9NPB8 672 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 MYH6P13533 1939 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 WBP4O75554 376 aaKnown RBP13.1□□□□□ -0.31
PDE12-201ENST00000311180 TMOD1P28289 359 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 CDK13Q14004 1512 aaKnown RBP13.1□□□□□ -0.31
PDE12-201ENST00000311180 SMCO2A6NFE2 343 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 CCND1P24385 295 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 PSMA3P25788 255 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 ARL4CP56559 192 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 TRADDQ15628 312 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 TJAP1Q5JTD0 557 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 FAM26FQ5R3K3 315 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 KHDRBS2Q5VWX1 349 aaKnown RBP13.1□□□□□ -0.31
PDE12-201ENST00000311180 NCAPG2Q86XI2 1143 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 EPAS1Q99814 870 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 GINS4Q9BRT9 223 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 CXorf56Q9H5V9 222 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 VIPAS39Q9H9C1 493 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 NIP7Q9Y221 180 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDE12-201ENST00000311180 IVNS1ABPQ9Y6Y0 642 aa13.1□□□□□ -0.31
PDE12-201ENST00000311180 FAM95CA0A1B0GW59 222 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms