RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 SLMAPQ14BN4 828 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 TEX12Q9BXU0 123 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 SLC39A2Q9NP94 309 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 TXLNGQ9NUQ3 528 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 OVOS2A0A0G2JMS6 1433 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 OVOS2A0A0J9YW53 1432 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 OVOS2Q6IE36 1432 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 ECEL1O95672 775 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 ARL6IP4Q66PJ3 421 aaKnown RBP12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 TUBB6Q9BUF5 446 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 CAPS2Q9BXY5 557 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 CLTCL1P53675 1640 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 M0R2C6 588 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 MAN2A1Q16706 1144 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 PPP1R18Q6NYC8 613 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 ZNF212Q9UDV6 495 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 TMCC1O94876 653 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 KAT6AQ92794 2004 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 SERPINB6P35237 376 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 TNFAIP2Q03169 654 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 FAM186BQ8IYM0 893 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 PBKQ96KB5 322 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 ADGRB3O60242 1522 aa12.24□□□□□ -0.45
VCPIP1-201ENST00000310421 ZNF653Q96CK0 615 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 LRRC4Q9HBW1 653 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 QTRT2Q9H974 415 aaKnown RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 GPC4O75487 556 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 PHEXP78562 749 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 NRBF2Q96F24 287 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 CLEC4GQ6UXB4 293 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 SPDYE1Q8NFV5 336 aaPredicted RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 EPN1Q9Y6I3 576 aaPredicted RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 TSTA3Q13630 321 aaPredicted RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 ATP6V1E2Q96A05 226 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 IRAK4Q9NWZ3 460 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 ASNSP08243 561 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 RABGGTAQ92696 567 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 ABT1Q9ULW3 272 aaKnown RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 TNNQ9UQP3 1299 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 COPB1P53618 953 aaKnown RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 AP3B2Q13367 1082 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 THOC5Q13769 683 aaKnown RBP12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 DNAAF3Q8N9W5 541 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 SPDL1Q96EA4 605 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 ACTN1P12814 892 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 CUL1Q13616 776 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 ANKRD42Q8N9B4 389 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 STRIP2Q9ULQ0 834 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 PCDHA7Q9UN72 937 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 SETBP1Q9Y6X0 1596 aa12.23□□□□□ -0.45
VCPIP1-201ENST00000310421 IKBKBO14920 756 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 EPHB4P54760 987 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 TOPORSQ9NS56 1045 aaPredicted RBP12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 CEP170P1Q96L14 293 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 TSPYL2Q9H2G4 693 aaPredicted RBP12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 SMYD2Q9NRG4 433 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 SYNJ2BP-COX16A0A087WUM0 186 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 CLGNO14967 610 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 SLC39A14Q15043 492 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 THAP9Q9H5L6 903 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 ATP6V0A4Q9HBG4 840 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 COX16Q9P0S2 106 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 NDUFB9Q9Y6M9 179 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 GSTA4O15217 222 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 KYAT1Q16773 422 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 CHMP6Q96FZ7 201 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 NVLO15381 856 aaKnown RBP12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 KAZNQ674X7 775 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 KRT27Q7Z3Y8 459 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 KIAA1210Q9ULL0 1709 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 PYGLP06737 847 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 WHAMMQ8TF30 809 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 VPS39Q96JC1 886 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 ADRA2BP18089 450 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 ELF1P32519 619 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 PHKA2P46019 1235 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 URGCPQ8TCY9 931 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 GREM2Q9H772 168 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 KIAA1586Q9HCI6 787 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 IFNA8P32881 189 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 P2RX5Q93086 422 aa12.22□□□□□ -0.45
VCPIP1-201ENST00000310421 RFX7Q2KHR2 1363 aa12.21□□□□□ -0.45
VCPIP1-201ENST00000310421 HMGB3O15347 200 aaKnown RBP12.21□□□□□ -0.45
VCPIP1-201ENST00000310421 DDX5P17844 614 aaKnown RBP12.21□□□□□ -0.45
VCPIP1-201ENST00000310421 SAT1P21673 171 aa12.21□□□□□ -0.45
VCPIP1-201ENST00000310421 NR1H3Q13133 447 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms