RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 TRPA1O75762 1119 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 POLR2MP0CAP2 368 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 BCRP11274 1271 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 RCN2Q14257 317 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 ADALQ6DHV7 355 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SLC35F6Q8N357 371 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PDCD7Q8N8D1 485 aaKnown RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 GRK7Q8WTQ7 553 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SAAL1Q96ER3 474 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 FAM227BQ96M60 508 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 YY1AP1Q9H869 796 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 V9GY48 417 aaPredicted RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 AHDC1Q5TGY3 1603 aaPredicted RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 TMEM232C9JQI7 657 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SGSM2O43147 1006 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SART1O43290 800 aaKnown RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 CREB3O43889 395 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SKIP12755 728 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 ESRRGP62508 458 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PDCD2Q16342 344 aaPredicted RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 KRT40Q6A162 431 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PROCA1Q8NCQ7 364 aaPredicted RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 GLG1Q92896 1179 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 HAUS8Q9BT25 410 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PRDM1O75626 825 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 KRT3P12035 628 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 ABCB4P21439 1286 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 IL9RQ01113 521 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SP4Q02446 784 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 ARHGAP44Q17R89 818 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 FBXO11Q86XK2 927 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PHKBQ93100 1093 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 RIC8AQ9NPQ8 531 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 SCINQ9Y6U3 715 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PHLPP2Q6ZVD8 1323 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 ENC1O14682 589 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 CA12O43570 354 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PKP1Q13835 747 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PPP2R5EQ16537 467 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 HIBCHQ6NVY1 386 aaPredicted RBP8.9□□□□□ -0.98
VPS41-202ENST00000310301 FAM151AQ8WW52 585 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 RSAD2Q8WXG1 361 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 LRGUKQ96M69 825 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 PARD6BQ9BYG5 372 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 FANCLQ9NW38 375 aa8.9□□□□□ -0.98
VPS41-202ENST00000310301 KBTBD13C9JR72 458 aa8.9□□□□□ -0.99
VPS41-202ENST00000310301 ANKRD65E5RJM6 399 aa8.9□□□□□ -0.99
VPS41-202ENST00000310301 MYCP01106 439 aaPredicted RBP8.9□□□□□ -0.99
VPS41-202ENST00000310301 BMP3P12645 472 aa8.9□□□□□ -0.99
VPS41-202ENST00000310301 EPHB4P54760 987 aa8.9□□□□□ -0.99
VPS41-202ENST00000310301 HERC4Q5GLZ8 1057 aaPredicted RBP8.9□□□□□ -0.99
VPS41-202ENST00000310301 CENPKQ9BS16 269 aa8.9□□□□□ -0.99
VPS41-202ENST00000310301 ZNF70Q9UC06 446 aaPredicted RBP8.9□□□□□ -0.99
VPS41-202ENST00000310301 PNMA6EA0A0J9YXQ4 647 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 CHMP2AO43633 222 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 APLP1P51693 650 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 ARHGAP4P98171 946 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 CDAN1Q8IWY9 1227 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 FBXO18Q8NFZ0 1043 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS41-202ENST00000310301 YIPF3Q9GZM5 350 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 DEFB129Q9H1M3 183 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 ADCY7P51828 1080 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 MECOMQ03112 1051 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 RNF34Q969K3 372 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 SDCCAG3Q96C92 435 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 TYW1Q9NV66 732 aaKnown RBP8.89□□□□□ -0.99
VPS41-202ENST00000310301 PKD2L1Q9P0L9 805 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 MROH7-TTC4A0A0A0MT08 1334 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 TMOD1P28289 359 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 RANBP1P43487 201 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 SLC12A2P55011 1212 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 CXCL9Q07325 125 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 GOLGA8FQ08AF8 430 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 GOLGA8DPQ0D2H9 430 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 NNTQ13423 1086 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 BIRC2Q13490 618 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 ME3Q16798 604 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 ASPRV1Q53RT3 343 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 BSPRYQ5W0U4 402 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 MAP1SQ66K74 1059 aaPredicted RBP8.89□□□□□ -0.99
VPS41-202ENST00000310301 TADA2BQ86TJ2 420 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 IFNL3Q8IZI9 196 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 PIP4K2CQ8TBX8 421 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 ZC4H2Q9NQZ6 224 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 KCNJ14Q9UNX9 436 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 NR2E3Q9Y5X4 410 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 WDR46O15213 610 aaKnown RBP8.89□□□□□ -0.99
VPS41-202ENST00000310301 GDF11O95390 407 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 GYS2P54840 703 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 FAM160B1Q5W0V3 765 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 HAUS3Q68CZ6 603 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 CABP7Q86V35 215 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 DSCC1Q9BVC3 393 aa8.89□□□□□ -0.99
VPS41-202ENST00000310301 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.89□□□□□ -0.99
VPS41-202ENST00000310301 CAMTA1Q9Y6Y1 1673 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms