RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CALD1Q05682 793 aaKnown RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 PRAMEF18Q5VWM3 479 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 ATF7IPQ6VMQ6 1270 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 TMC4Q7Z404 712 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 C2orf69Q8N8R5 385 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 PLBD2Q8NHP8 589 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 ARHGAP45Q92619 1136 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 KCNB2Q92953 911 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 SNX21Q969T3 373 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 MXD3Q9BW11 206 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 EPB41L4BQ9H329 900 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 TUT1Q9H6E5 874 aaKnown RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 PARD6AQ9NPB6 346 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 PODXL2Q9NZ53 605 aa5.96□□□□□ -1.46
CKS1B-201ENST00000308987 GPN3Q9UHW5 284 aaPredicted RBP5.96□□□□□ -1.46
CKS1B-201ENST00000308987 ZSWIM8A7E2V4 1837 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 UBE2Q2LH0YL09 131 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 NDUFB5O43674 189 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 FOXD2O60548 495 aaPredicted RBP5.95□□□□□ -1.46
CKS1B-201ENST00000308987 GLDCP23378 1020 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 MCM4P33991 863 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 RBM25P49756 843 aaKnown RBP5.95□□□□□ -1.46
CKS1B-201ENST00000308987 CLCN7P51798 805 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 FAAP100Q0VG06 881 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 ORC1Q13415 861 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 NBPF9Q3BBW0 867 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 RPS26P11Q5JNZ5 115 aaPredicted RBP5.95□□□□□ -1.46
CKS1B-201ENST00000308987 DBX2Q6ZNG2 339 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 RNF214Q8ND24 703 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 KCNN1Q92952 543 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 DCPSQ96C86 337 aaKnown RBP5.95□□□□□ -1.46
CKS1B-201ENST00000308987 C22orf23Q9BZE7 217 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 IRF2BPLQ9H1B7 796 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 TMX4Q9H1E5 349 aaPredicted RBP5.95□□□□□ -1.46
CKS1B-201ENST00000308987 PHAXQ9H814 394 aaKnown RBP5.95□□□□□ -1.46
CKS1B-201ENST00000308987 SMC4Q9NTJ3 1288 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 ZBTB40Q9NUA8 1239 aa5.95□□□□□ -1.46
CKS1B-201ENST00000308987 DNAH12Q6ZR08 3092 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 FSD2A1L4K1 749 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 CPNE3O75131 537 aaKnown RBP5.94□□□□□ -1.46
CKS1B-201ENST00000308987 UFL1O94874 794 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 TBC1D8O95759 1140 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 ZNF853P0CG23 659 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 TRIM27P14373 513 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 LINC00310P59036 64 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 CAP1Q01518 475 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 NUCB1Q02818 461 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
CKS1B-201ENST00000308987 CTU1Q7Z7A3 348 aaKnown RBP5.94□□□□□ -1.46
CKS1B-201ENST00000308987 CCDC82Q8N4S0 544 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 ZNF296Q8WUU4 475 aaPredicted RBP5.94□□□□□ -1.46
CKS1B-201ENST00000308987 SSH1Q8WYL5 1049 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 GCC1Q96CN9 775 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 ATP13A1Q9HD20 1204 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 PICK1Q9NRD5 415 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 FZD1Q9UP38 647 aa5.94□□□□□ -1.46
CKS1B-201ENST00000308987 SSC5DA1L4H1 1573 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 HOXB7P09629 217 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 DDIT3P35638 169 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
CKS1B-201ENST00000308987 ZC3H12AQ5D1E8 599 aaKnown RBP5.93□□□□□ -1.46
CKS1B-201ENST00000308987 BMP2KLQ5H9B9 411 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 DACT2Q5SW24 774 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 DTHD1Q6ZMT9 781 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 NPAS4Q8IUM7 802 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 HSCBQ8IWL3 235 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 ZBTB38Q8NAP3 1195 aaPredicted RBP5.93□□□□□ -1.46
CKS1B-201ENST00000308987 AGBL3Q8NEM8 1001 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 MYD88Q99836 296 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 ABCB6Q9NP58 842 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 MYOZ2Q9NPC6 264 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 SEMA3GQ9NS98 782 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 DBF4Q9UBU7 674 aaPredicted RBP5.93□□□□□ -1.46
CKS1B-201ENST00000308987 UNC80Q8N2C7 3258 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 AOX1Q06278 1338 aa5.93□□□□□ -1.46
CKS1B-201ENST00000308987 DOCK3Q8IZD9 2030 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 CUL9Q8IWT3 2517 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 GOLGA6L3A6NEY3 463 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
CKS1B-201ENST00000308987 WNT10BO00744 389 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 EOMESO95936 686 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 PCCAP05165 728 aaPredicted RBP5.92□□□□□ -1.46
CKS1B-201ENST00000308987 IGKV5-2P06315 115 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 KLRK1P26718 216 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 TM4SF4P48230 202 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 MRE11P49959 708 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 ERVK-24P63145 666 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 PDZD3Q86UT5 571 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 C8orf58Q8NAV2 365 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 ZBED3Q96IU2 234 aaPredicted RBP5.92□□□□□ -1.46
CKS1B-201ENST00000308987 HSPA12BQ96MM6 686 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 EYA3Q99504 573 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 KRTAP9-8Q9BYQ0 159 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 SLKQ9H2G2 1235 aaPredicted RBP5.92□□□□□ -1.46
CKS1B-201ENST00000308987 ZCCHC4Q9H5U6 513 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 GREM2Q9H772 168 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 HYPKQ9NX55 129 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 TNNQ9UQP3 1299 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 PCDHAC2Q9Y5I4 1007 aa5.92□□□□□ -1.46
CKS1B-201ENST00000308987 XDHP47989 1333 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms