RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 GARSP41250 739 aaKnown RBP13.67□□□□□ -0.22
USP38-201ENST00000307017 GNPTABQ3T906 1256 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 SPATA1Q5VX52 437 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 SLC52A2Q9HAB3 445 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 USP17L3A6NCW0 530 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 USP17L4A6NCW7 530 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 SCG2P13521 617 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 KRT31Q15323 416 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 LRRC23Q53EV4 343 aaPredicted RBP13.67□□□□□ -0.22
USP38-201ENST00000307017 USP17L1Q7RTZ2 530 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.67□□□□□ -0.22
USP38-201ENST00000307017 PIGOQ8TEQ8 1089 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 SUCLA2Q9P2R7 463 aaPredicted RBP13.67□□□□□ -0.22
USP38-201ENST00000307017 EXOC1LA0A1B0GW35 172 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 TRAIPQ9BWF2 469 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 FLT4P35916 1363 aa13.67□□□□□ -0.22
USP38-201ENST00000307017 MTERF2Q49AM1 385 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ARHGAP26Q9UNA1 814 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 H0YIN7 160 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ZNF500O60304 480 aaPredicted RBP13.66□□□□□ -0.22
USP38-201ENST00000307017 IL13P35225 146 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ANKRD20A4Q4UJ75 823 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ANKRD20A8PQ5CZ79 823 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ANKRD20A2Q5SQ80 823 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ANKRD20A1Q5TYW2 823 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 SCOCQ9UIL1 159 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ATP6V1E1P36543 226 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 OCRLQ01968 901 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 CASP8Q14790 479 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 PCGF5Q86SE9 256 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ZNF496Q96IT1 587 aaPredicted RBP13.66□□□□□ -0.22
USP38-201ENST00000307017 SH3TC1Q8TE82 1336 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 GOLGA8RI6L899 631 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 PRPSAP1Q14558 356 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 FBXO11Q86XK2 927 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ORC6Q9Y5N6 252 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ERBB4Q15303 1308 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 H2AFZP0C0S5 128 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 PRR29P0C7W0 189 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 ESRRAP11474 423 aaPredicted RBP13.66□□□□□ -0.22
USP38-201ENST00000307017 P4HA1P13674 534 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 NR1D1P20393 614 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 H2AFVQ71UI9 128 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 PIGSQ96S52 555 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 CDC23Q9UJX2 597 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 RNF8O76064 485 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 MT-ND3P03897 115 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
USP38-201ENST00000307017 DBNDD1Q9H9R9 158 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 SEC31BQ9NQW1 1179 aa13.66□□□□□ -0.22
USP38-201ENST00000307017 INO80B-WBP1J3KQ70 363 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 PALMO75781 387 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 SYF2O95926 243 aaKnown RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 DLGAP5Q15398 846 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 RNF207Q6ZRF8 634 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 TRIML2Q8N7C3 387 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 INO80BQ9C086 356 aaPredicted RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 ZBTB17Q13105 803 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 OR6B2Q6IFH4 312 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 NR1H4Q96RI1 486 aaPredicted RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 TSC22D3Q99576 134 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 SH2D4AQ9H788 454 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 POLIQ9UNA4 740 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 FANCAO15360 1455 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 EPHB1P54762 984 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 HEXIM2Q96MH2 286 aaKnown RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 IWS1Q96ST2 819 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 JRKLQ9Y4A0 524 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 YTHDC2Q9H6S0 1430 aaKnown RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 ZNF185O15231 689 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 NOP14P78316 857 aaKnown RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 TMC4Q7Z404 712 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 TRPC5Q9UL62 973 aaPredicted RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 USP17L8P0C7I0 530 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 MYBP10242 640 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 PDCD2Q16342 344 aaPredicted RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 ARHGEF18Q6ZSZ5 1173 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 TBCKQ8TEA7 893 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 SAYSD1Q9NPB0 183 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 WARS2Q9UGM6 360 aaKnown RBP13.65□□□□□ -0.22
USP38-201ENST00000307017 HEY1Q9Y5J3 304 aa13.65□□□□□ -0.22
USP38-201ENST00000307017 GNA14O95837 355 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 CHRNDQ07001 517 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 THOC5Q13769 683 aaKnown RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 ZFYVE19Q96K21 471 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 ZSWIM6Q9HCJ5 1215 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 GTSE1Q9NYZ3 720 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 KDM3AQ9Y4C1 1321 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 MYO1FO00160 1098 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 LUC7L3O95232 432 aaKnown RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 VCPP55072 806 aaKnown RBP13.64□□□□□ -0.23
USP38-201ENST00000307017 WDR48Q8TAF3 677 aa13.64□□□□□ -0.23
USP38-201ENST00000307017 MS4A14Q96JA4 679 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms