RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 NAP1L4Q99733 375 aaKnown RBP12.67□□□□□ -0.38
SCG2-201ENST00000305409 EIF2AK1Q9BQI3 630 aaKnown RBP12.67□□□□□ -0.38
SCG2-201ENST00000305409 SGIP1Q9BQI5 828 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 NT5C3AQ9H0P0 336 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 BHMT2Q9H2M3 363 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 ZNF215Q9UL58 517 aaPredicted RBP12.67□□□□□ -0.38
SCG2-201ENST00000305409 PCNTO95613 3336 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 PIK3CDO00329 1044 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 EEF1GP26641 437 aaKnown RBP12.67□□□□□ -0.38
SCG2-201ENST00000305409 CASP5P51878 434 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 MAP3K10Q02779 954 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 MIIPQ5JXC2 388 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 SH2D4AQ9H788 454 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 BMP2KQ9NSY1 1161 aaPredicted RBP12.67□□□□□ -0.38
SCG2-201ENST00000305409 TFR2Q9UP52 801 aa12.67□□□□□ -0.38
SCG2-201ENST00000305409 MRPL11Q9Y3B7 192 aaKnown RBP12.67□□□□□ -0.38
SCG2-201ENST00000305409 KDM3AQ9Y4C1 1321 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 RASSF10A6NK89 507 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 CIITAP33076 1130 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 GTF2F1P35269 517 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCG2-201ENST00000305409 GNG11P61952 73 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 EHHADHQ08426 723 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 TNFAIP1Q13829 316 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 HYIQ5T013 277 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 LRCH2Q5VUJ6 765 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 ARHGAP27Q6ZUM4 889 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 RUSC1Q9BVN2 902 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 EMILIN3Q9NT22 766 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 DNM3Q9UQ16 869 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCG2-201ENST00000305409 FZD9O00144 591 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 ZSCAN12O43309 604 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 TPM1P09493 284 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 KCNJ6P48051 423 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 ETF1P62495 437 aaKnown RBP12.66□□□□□ -0.38
SCG2-201ENST00000305409 MOXD1Q6UVY6 613 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 FAM160B2Q86V87 743 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 CNGA4Q8IV77 575 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 MYOCDQ8IZQ8 938 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 GUF1Q8N442 669 aaKnown RBP12.66□□□□□ -0.38
SCG2-201ENST00000305409 DYDC2Q96IM9 177 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 WRNIP1Q96S55 665 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 SLF1Q9BQI6 1058 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 IKZF4Q9H2S9 585 aa12.66□□□□□ -0.38
SCG2-201ENST00000305409 TRAF5O00463 557 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 VCAM1P19320 739 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
SCG2-201ENST00000305409 RPA1P27694 616 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 EPS15P42566 896 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 HAUS3Q68CZ6 603 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 OTOP1Q7RTM1 612 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 FAM20AQ96MK3 541 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 SH2D3AQ9BRG2 576 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 REEP2Q9BRK0 252 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 RPAP3Q9H6T3 665 aaPredicted RBP12.65□□□□□ -0.38
SCG2-201ENST00000305409 WRAP73Q9P2S5 460 aaPredicted RBP12.65□□□□□ -0.38
SCG2-201ENST00000305409 SYNPO2Q9UMS6 1093 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 ADGRG1Q9Y653 693 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
SCG2-201ENST00000305409 EPHB6O15197 1021 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 GAS7O60861 476 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 CYP3A4P08684 503 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 CEP55Q53EZ4 464 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 PRPF38AQ8NAV1 312 aaKnown RBP12.65□□□□□ -0.39
SCG2-201ENST00000305409 ERMNQ8TAM6 284 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 WDR11Q9BZH6 1224 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 FAM207AQ9NSI2 230 aaPredicted RBP12.65□□□□□ -0.39
SCG2-201ENST00000305409 PCDHA2Q9Y5H9 948 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 CD2APQ9Y5K6 639 aa12.65□□□□□ -0.39
SCG2-201ENST00000305409 PEX10O60683 326 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 URI1O94763 535 aaPredicted RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 ICAM1P05362 532 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 RPS12P25398 132 aaKnown RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 APBA1Q02410 837 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 GIT2Q14161 759 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 LRRC55Q6ZSA7 311 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 SFR1Q86XK3 245 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 CCDC65Q8IXS2 484 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 SCFD1Q8WVM8 642 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 ATG4CQ96DT6 458 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 ZNF577Q9BSK1 485 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 LUC7L2Q9Y383 392 aaKnown RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 ZHX2Q9Y6X8 837 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 TBX3O15119 743 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 CTNND1O60716 968 aaKnown RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 PSMD10O75832 226 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 PRPF6O94906 941 aaKnown RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 SLITRK3O94933 977 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 MYBP10242 640 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 ITGB5P18084 799 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 DNM2P50570 870 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 HIRAP54198 1017 aaPredicted RBP12.64□□□□□ -0.39
SCG2-201ENST00000305409 HMGCS2P54868 508 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 KCNA1Q09470 495 aa12.64□□□□□ -0.39
SCG2-201ENST00000305409 MAEAQ7L5Y9 396 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms