RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 KCNMA1Q12791 1236 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 NONOQ15233 471 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 DAAM2Q86T65 1068 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 TBCKQ8TEA7 893 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 SNX29Q8TEQ0 813 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 DCP1AQ9NPI6 582 aaPredicted RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 TJP1Q07157 1748 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 MYH7P12883 1935 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 SERPING1P05155 500 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 HGSNATQ68CP4 663 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 ZNF572Q7Z3I7 529 aaPredicted RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 MGARPQ8TDB4 240 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 RUBCNQ92622 972 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 INPP4AQ96PE3 977 aaPredicted RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 UBA5Q9GZZ9 404 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 CHRM1P11229 460 aaPredicted RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 PRDX5P30044 214 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 HSPA9P38646 679 aaKnown RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 MMP14P50281 582 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 NAB2Q15742 525 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 STAMBPL1Q96FJ0 436 aa16.07■□□□□ 0.16
COL6A2-201ENST00000300527 SEPT11Q9NVA2 429 aaKnown RBP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
COL6A2-201ENST00000300527 A0A1B0GUA9 196 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 CENPPQ6IPU0 288 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 TMED8Q6PL24 325 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 DDX12PQ92771 950 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 C7orf25Q9BPX7 421 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 ELAC2Q9BQ52 826 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 PKD1L3Q7Z443 1732 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 MYH6P13533 1939 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 KIF1CO43896 1103 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 KRT18P05783 430 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 KLRK1P26718 216 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 MEI1Q5TIA1 1274 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 NAIF1Q69YI7 327 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 PEX26Q7Z412 305 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 MARCH10Q8NA82 808 aaPredicted RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 PLCB1Q9NQ66 1216 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 NOC2LQ9Y3T9 749 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 FLT1P17948 1338 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 TNFRSF8P28908 595 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 HNRNPH3P31942 346 aaKnown RBP16.06■□□□□ 0.16
COL6A2-201ENST00000300527 MECOMQ03112 1051 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 NBPF9Q3BBW0 867 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 CCDC63Q8NA47 563 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 ISCUQ9H1K1 167 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 ATP6V0A2Q9Y487 856 aa16.06■□□□□ 0.16
COL6A2-201ENST00000300527 CYTH3O43739 400 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 MYL1P05976 194 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 GCFC2P16383 781 aaKnown RBP16.05■□□□□ 0.16
COL6A2-201ENST00000300527 MKRN4PQ13434 485 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-201ENST00000300527 DCAF17Q5H9S7 520 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-201ENST00000300527 LRCH2Q5VUJ6 765 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 RCSD1Q6JBY9 416 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 USP17L2Q6R6M4 530 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 C6orf89Q6UWU4 347 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 KSR1Q8IVT5 923 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 RNF14Q9UBS8 474 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 STK38LQ9Y2H1 464 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 PJA2O43164 708 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 TNNI2P48788 182 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 NEK8Q86SG6 692 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 ZNF444Q8N0Y2 327 aaPredicted RBP16.05■□□□□ 0.16
COL6A2-201ENST00000300527 BRIP1Q9BX63 1249 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
COL6A2-201ENST00000300527 RAD21O60216 631 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 KIF4AO95239 1232 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 CALCRLQ16602 461 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 CCDC38Q502W7 563 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 MYOCDQ8IZQ8 938 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 NLRP3Q96P20 1036 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 NOD2Q9HC29 1040 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 COL4A3BPQ9Y5P4 624 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 LRP6O75581 1613 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 C1orf167Q5SNV9 1468 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 NPHP3-ACAD11A0A0J9YXS1 232 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 SLC18A3Q16572 532 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 KCNK18Q7Z418 384 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 CD302Q8IX05 232 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 ZNF384Q8TF68 577 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 ANKS1AQ92625 1134 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 MMTAG2Q9BU76 263 aaKnown RBP16.04■□□□□ 0.16
COL6A2-201ENST00000300527 MLXIPLQ9NP71 852 aa16.04■□□□□ 0.16
COL6A2-201ENST00000300527 STXBP3O00186 592 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms