RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 TSGA10Q9BZW7 698 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 FAM207AQ9NSI2 230 aaPredicted RBP21.91■■□□□ 1.1
NFIL3-201ENST00000297689 PANK4Q9NVE7 773 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 PI4KBQ9UBF8 816 aa21.91■■□□□ 1.1
NFIL3-201ENST00000297689 PSME4Q14997 1843 aa21.9■■□□□ 1.1
NFIL3-201ENST00000297689 E9PMD0 336 aa21.9■■□□□ 1.1
NFIL3-201ENST00000297689 SLFN13Q68D06 897 aa21.9■■□□□ 1.1
NFIL3-201ENST00000297689 RPGRIP1Q96KN7 1286 aa21.9■■□□□ 1.1
NFIL3-201ENST00000297689 CEP63Q96MT8 703 aa21.9■■□□□ 1.1
NFIL3-201ENST00000297689 TSG101Q99816 390 aa21.9■■□□□ 1.1
NFIL3-201ENST00000297689 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.9■■□□□ 1.1
NFIL3-201ENST00000297689 H3BQF6 201 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 PPIP5K2O43314 1243 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 SRGAP2O75044 1071 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 CYP11B2P19099 503 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 SLC1A4P43007 532 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 MMP14P50281 582 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 KIF5AQ12840 1032 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 AP3B2Q13367 1082 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 CDC37Q16543 378 aaPredicted RBP21.89■■□□□ 1.1
NFIL3-201ENST00000297689 CERKLQ49MI3 558 aaPredicted RBP21.89■■□□□ 1.1
NFIL3-201ENST00000297689 ETNPPLQ8TBG4 499 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 KCTD10Q9H3F6 313 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 PCDHA13Q9Y5I0 950 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 COL4A3BPQ9Y5P4 624 aa21.89■■□□□ 1.1
NFIL3-201ENST00000297689 PLA2G4BP0C869 781 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 EIF4A3P38919 411 aaKnown RBP21.89■■□□□ 1.09
NFIL3-201ENST00000297689 KIF11P52732 1056 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 MAPK8IP2Q13387 824 aaPredicted RBP21.89■■□□□ 1.09
NFIL3-201ENST00000297689 PDXDC1Q6P996 788 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 SUPT20HQ8NEM7 779 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 GBP3Q9H0R5 595 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 SH2D4AQ9H788 454 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 MMRN2Q9H8L6 949 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 KIAA1024Q9UPX6 916 aa21.89■■□□□ 1.09
NFIL3-201ENST00000297689 LRRC53A6NM62 1247 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 PJA2O43164 708 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 SPA17Q15506 151 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 ARSHQ5FYA8 562 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 HGSNATQ68CP4 663 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 SECISBP2LQ93073 1101 aaKnown RBP21.88■■□□□ 1.09
NFIL3-201ENST00000297689 TDRD3Q9H7E2 651 aaKnown RBP21.88■■□□□ 1.09
NFIL3-201ENST00000297689 SUGCTQ9HAC7 445 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 BMP2KQ9NSY1 1161 aaPredicted RBP21.88■■□□□ 1.09
NFIL3-201ENST00000297689 PITPNM2Q9BZ72 1349 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 COL4A5P29400 1685 aa21.88■■□□□ 1.09
NFIL3-201ENST00000297689 POTEB3A0JP26 581 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 POTECB2RU33 542 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 PDE2AO00408 941 aaPredicted RBP21.87■■□□□ 1.09
NFIL3-201ENST00000297689 POLR3GO15318 223 aaPredicted RBP21.87■■□□□ 1.09
NFIL3-201ENST00000297689 MED24O75448 989 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 NOL4O94818 638 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 KCNA3P22001 575 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 SLC12A3P55017 1021 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 POTEBQ6S5H4 581 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 TRIM59Q8IWR1 403 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 GMCL1P1Q8NEA9 526 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 LENG9Q96B70 501 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 SSU72P8A0A1W2PR75 194 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 TBX3O15119 743 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 PRLRP16471 622 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 RRAGAQ7L523 313 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 ZNF572Q7Z3I7 529 aaPredicted RBP21.87■■□□□ 1.09
NFIL3-201ENST00000297689 CCDC65Q8IXS2 484 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 SLFN12Q8IYM2 578 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 CCDC155Q8N6L0 562 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 TRIM58Q8NG06 486 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 SCFD1Q8WVM8 642 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 PRMT6Q96LA8 375 aaPredicted RBP21.87■■□□□ 1.09
NFIL3-201ENST00000297689 IFIH1Q9BYX4 1025 aaKnown RBP21.87■■□□□ 1.09
NFIL3-201ENST00000297689 ATAD5Q96QE3 1844 aa21.87■■□□□ 1.09
NFIL3-201ENST00000297689 GOLGB1Q14789 3259 aaKnown RBP21.86■■□□□ 1.09
NFIL3-201ENST00000297689 TARSL2A2RTX5 802 aaKnown RBP21.86■■□□□ 1.09
NFIL3-201ENST00000297689 RBAK-RBAKDNI3L0D1 243 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 MARCH6O60337 910 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 ARHGAP4P98171 946 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 CKAP4Q07065 602 aaKnown RBP21.86■■□□□ 1.09
NFIL3-201ENST00000297689 Q4G0T1 1027 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 MCTP2Q6DN12 878 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 TMEM179Q6ZVK1 233 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 SYN2Q92777 582 aaPredicted RBP21.86■■□□□ 1.09
NFIL3-201ENST00000297689 GMCL1Q96IK5 515 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 JRKLQ9Y4A0 524 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 TRAF5O00463 557 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 SNX12Q9UMY4 172 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 CAPN6Q9Y6Q1 641 aa21.86■■□□□ 1.09
NFIL3-201ENST00000297689 MACROD2A1Z1Q3 448 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 F5H6K3 240 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 USO1O60763 962 aaKnown RBP21.85■■□□□ 1.09
NFIL3-201ENST00000297689 GNA14O95837 355 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 KLRC3Q07444 240 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 CASP8Q14790 479 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 GPBP1Q86WP2 473 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 CREG2Q8IUH2 290 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 TTLL6Q8N841 843 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 NEK11Q8NG66 645 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 ATRNL1Q5VV63 1379 aa21.85■■□□□ 1.09
NFIL3-201ENST00000297689 NPHP3-ACAD11A0A0J9YXS1 232 aa21.84■■□□□ 1.09
NFIL3-201ENST00000297689 TLR2O60603 784 aa21.84■■□□□ 1.09
NFIL3-201ENST00000297689 ZBTB7AO95365 584 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms