RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 LRRC37A3O60309 1634 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 TRAPPC3O43617 180 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 TROAPQ12815 778 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 UAP1Q16222 522 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 FAM83BQ5T0W9 1011 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 CNNM4Q6P4Q7 775 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 FAM47EQ6ZV65 393 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 SV2BQ7L1I2 683 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 ARMC2Q8NEN0 867 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 KLHL29Q96CT2 875 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 ABCF3Q9NUQ8 709 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 RBM28Q9NW13 759 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 MCM9Q9NXL9 1143 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 SHBGP04278 402 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 BRD2P25440 801 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 PCK1P35558 622 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 AMPD3Q01432 767 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 ASIC2Q16515 512 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 MAN2A1Q16706 1144 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 PPP4R3AQ6IN85 833 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 PSMD1Q99460 953 aa11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 DBR1Q9UK59 544 aaKnown RBP11.33□□□□□ -0.6
ARHGEF3-201ENST00000296315 CCT8L1PA6NM43 557 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 GNAT2P19087 354 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 BICDL1Q6ZP65 573 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 FAM43BQ6ZT52 329 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 KIAA0895Q8NCT3 520 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 GLG1Q92896 1179 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 XPO6Q96QU8 1125 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 CHORDC1Q9UHD1 332 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 BCS1LQ9Y276 419 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 NOC2LQ9Y3T9 749 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 MAP3K15Q6ZN16 1313 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 POTEMA6NI47 508 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 CALML3P27482 149 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 IGHMBP2P38935 993 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 IFI35P80217 286 aaPredicted RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 SEC23AQ15436 765 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 PDXDC1Q6P996 788 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 USP38Q8NB14 1042 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 DYNLL2Q96FJ2 89 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 TFAP4Q01664 338 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 NPY5RQ15761 445 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 NLRP10Q86W26 655 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 U2AF1L4Q8WU68 220 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 PURBQ96QR8 312 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 PTPN22Q9Y2R2 807 aa11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 UTP11Q9Y3A2 253 aaKnown RBP11.32□□□□□ -0.6
ARHGEF3-201ENST00000296315 ABCC12Q96J65 1359 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 USP17L3A6NCW0 530 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 USP17L4A6NCW7 530 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 UBOX5O94941 541 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 FGGP02679 453 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 ALX1Q15699 326 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 USP17L1Q7RTZ2 530 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 CNTNAP5Q8WYK1 1306 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 GOLGA6L10A0A0M3HER8 536 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 IGF2BP3O00425 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 KIF5BP33176 963 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 TAF11Q15544 211 aa11.31□□□□□ -0.6
ARHGEF3-201ENST00000296315 GRID2IPA4D2P6 1211 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 C21orf2O43822 256 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 STARD3NLO95772 234 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 FGFR4P22455 802 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 C6orf89Q6UWU4 347 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 ERGIC2Q96RQ1 377 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 ECT2Q9H8V3 914 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TBK1Q9UHD2 729 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TSKSQ9UJT2 592 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 PGRMC1O00264 195 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 CALM1P0DP23 149 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 CALM2P0DP24 149 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 CALM3P0DP25 149 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 RNASELQ05823 741 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 ERICH1Q86X53 443 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 METTL13Q8N6R0 699 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 PNMA1Q8ND90 353 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 ATP6V0A4Q9HBG4 840 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 A1CFQ9NQ94 594 aaKnown RBP11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TMEM260Q9NX78 707 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TFCP2L1Q9NZI6 479 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TRPC6Q9Y210 931 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TMEM94Q12767 1356 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 OR52Z1P0C646 297 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 TNNI2P48788 182 aa11.3□□□□□ -0.6
ARHGEF3-201ENST00000296315 VPS41P49754 854 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms