RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 PANK4Q9NVE7 773 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 AFG3L2Q9Y4W6 797 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 SNCAIPQ9Y6H5 919 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 WDR90Q96KV7 1748 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 RNF225M0QZC1 329 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-203ENST00000291300 N4BP3O15049 544 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 MRPS9P82933 396 aaKnown RBP18.64■□□□□ 0.57
HIF3A-203ENST00000291300 VGLL4Q14135 290 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 HAUS3Q68CZ6 603 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 CSGALNACT2Q8N6G5 542 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 UNC45AQ9H3U1 944 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 WRAP73Q9P2S5 460 aaPredicted RBP18.64■□□□□ 0.57
HIF3A-203ENST00000291300 PPP2R3BQ9Y5P8 575 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 OTOFQ9HC10 1997 aa18.64■□□□□ 0.57
HIF3A-203ENST00000291300 RBL2Q08999 1139 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 COBLL1Q53SF7 1204 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 CENPPQ6IPU0 288 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 CPLX3Q8WVH0 158 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 DYDC2Q96IM9 177 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 CTAGE1Q96RT6 745 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 HSD17B14Q9BPX1 270 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 MXRA8Q9BRK3 442 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 ZNF577Q9BSK1 485 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 PCDHA2Q9Y5H9 948 aa18.63■□□□□ 0.57
HIF3A-203ENST00000291300 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
HIF3A-203ENST00000291300 ZBED4O75132 1171 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 SLITRK3O94933 977 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 EIF2AK2P19525 551 aaKnown RBP18.62■□□□□ 0.57
HIF3A-203ENST00000291300 GHRHRQ02643 423 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 SUPT20HL1Q3ZLR7 823 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 NOL9Q5SY16 702 aaKnown RBP18.62■□□□□ 0.57
HIF3A-203ENST00000291300 CCAR2Q8N163 923 aaKnown RBP18.62■□□□□ 0.57
HIF3A-203ENST00000291300 PIGOQ8TEQ8 1089 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 C12orf42Q96LP6 360 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 THAP9Q9H5L6 903 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 PAPPA2Q9BXP8 1791 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 GAS7O60861 476 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 PPP2R5CQ13362 524 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 TMEM132BQ14DG7 1078 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 MOB2Q70IA6 237 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 TEX2Q8IWB9 1127 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 ERMNQ8TAM6 284 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 RUSC1Q9BVN2 902 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 BHMT2Q9H2M3 363 aa18.62■□□□□ 0.57
HIF3A-203ENST00000291300 PITPNM2Q9BZ72 1349 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 DSG3P32926 999 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 NSMFQ6X4W1 530 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 SYT2Q8N9I0 419 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-203ENST00000291300 EHMT1Q9H9B1 1298 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 KCNH7Q9NS40 1196 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 RNF146Q9NTX7 359 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 ZNF214Q9UL59 606 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-203ENST00000291300 ADAMTS5Q9UNA0 930 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 DNM3Q9UQ16 869 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 RSPH10B2B2RC85 870 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 IPO5O00410 1097 aaKnown RBP18.61■□□□□ 0.57
HIF3A-203ENST00000291300 RSPH10BP0C881 870 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 GIT2Q14161 759 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 FILIP1LQ4L180 1135 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 B3GNT9Q6UX72 402 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 CATSPERGQ6ZRH7 1159 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 MCF2L2Q86YR7 1114 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 TPH2Q8IWU9 490 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 GUF1Q8N442 669 aaKnown RBP18.61■□□□□ 0.57
HIF3A-203ENST00000291300 POLR3CQ9BUI4 534 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-203ENST00000291300 LRRC27Q9C0I9 530 aa18.61■□□□□ 0.57
HIF3A-203ENST00000291300 CTDP1Q9Y5B0 961 aaPredicted RBP18.61■□□□□ 0.57
HIF3A-203ENST00000291300 PTPRFP10586 1907 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 GYPCP04921 128 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 FXR1P51114 621 aaKnown RBP eCLIP18.6■□□□□ 0.57
HIF3A-203ENST00000291300 CASP5P51878 434 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 SPAG1Q07617 926 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 ITGB3BPQ13352 177 aaPredicted RBP18.6■□□□□ 0.57
HIF3A-203ENST00000291300 BAATQ14032 418 aaPredicted RBP18.6■□□□□ 0.57
HIF3A-203ENST00000291300 FAM26FQ5R3K3 315 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 TREML2Q5T2D2 321 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 SNRNP48Q6IEG0 339 aaKnown RBP18.6■□□□□ 0.57
HIF3A-203ENST00000291300 CNOT6LQ96LI5 555 aaKnown RBP18.6■□□□□ 0.57
HIF3A-203ENST00000291300 REEP2Q9BRK0 252 aa18.6■□□□□ 0.57
HIF3A-203ENST00000291300 BICDL2A1A5D9 508 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 C19orf81C9J6K1 198 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 DHX15O43143 795 aaKnown RBP18.59■□□□□ 0.57
HIF3A-203ENST00000291300 SLC26A4O43511 780 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 ERCC3P19447 782 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 CASP14P31944 242 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 PGM5Q15124 567 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 TKFCQ3LXA3 575 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 HERC4Q5GLZ8 1057 aaPredicted RBP18.59■□□□□ 0.57
HIF3A-203ENST00000291300 RNF207Q6ZRF8 634 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 ZNF507Q8TCN5 953 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 DCPSQ96C86 337 aaKnown RBP18.59■□□□□ 0.57
HIF3A-203ENST00000291300 CLMNQ96JQ2 1002 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 ZHX3Q9H4I2 956 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 UBIAD1Q9Y5Z9 338 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 FRMPD4Q14CM0 1322 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 FRMD3A2A2Y4 597 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 B4DLN1 442 aa18.59■□□□□ 0.57
HIF3A-203ENST00000291300 EEF1GP26641 437 aaKnown RBP18.59■□□□□ 0.57
HIF3A-203ENST00000291300 MAP3K9P80192 1104 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms