RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LRRC53A6NM62 1247 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 ATP1A1P05023 1023 aaKnown RBP16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 DDIT3P35638 169 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 ZBTB1Q9Y2K1 713 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 PLA2G4BP0C869 781 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 MX2P20592 715 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 DBN1Q16643 649 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 NT5C1BQ96P26 610 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 SPZ1Q9BXG8 430 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 POLD4Q9HCU8 107 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 G3BP2Q9UN86 482 aaKnown RBP16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 GOLGA8SH3BPF8 625 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 NMT2O60551 498 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 KCNQ4P56696 695 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 MMEL1Q495T6 779 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 LARGE2Q8N3Y3 721 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 IWS1Q96ST2 819 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 IRX2Q9BZI1 471 aaPredicted RBP16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 CNOT10Q9H9A5 744 aaKnown RBP16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 TRPC6Q9Y210 931 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 SPECC1L-ADORA2AF8WAN1 911 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 SATB1Q01826 763 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 PTK2Q05397 1052 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 NUGGCQ68CJ6 796 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 ARHGEF18Q6ZSZ5 1173 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 CPVLQ9H3G5 476 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 GOLGA8IPA6NC78 632 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 GOLGA8JA6NMD2 632 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 TRPA1O75762 1119 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 ITKQ08881 620 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 RASGRF1Q13972 1273 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 C10orf76Q5T2E6 689 aa16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 SEPT9Q9UHD8 586 aaPredicted RBP16.61■□□□□ 0.25
SHROOM4-201ENST00000289292 ZNF185O15231 689 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 TNNC2P02585 160 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 MSH2P43246 934 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 IRX4P78413 519 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 ARHGEF25Q86VW2 580 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 CCDC125Q86Z20 511 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 SPDL1Q96EA4 605 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 GPR101Q96P66 508 aaPredicted RBP16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 CYTH2Q99418 400 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 ANLNQ9NQW6 1124 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 H0Y3Z8 333 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 GDF11O95390 407 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 YIPF3Q9GZM5 350 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 USP6P35125 1406 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 TMTC3Q6ZXV5 915 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 CXorf38Q8TB03 319 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 SNX24Q9Y343 169 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 POLGP54098 1239 aaPredicted RBP16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 MAP3K21Q5TCX8 1036 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 MAML1Q92585 1016 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 Q9H521 79 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 CYP2D6P10635 497 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 BASP1P80723 227 aaKnown RBP16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 CHURC1Q8WUH1 139 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
SHROOM4-201ENST00000289292 LAMC1P11047 1609 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 TOM1L1O75674 476 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 TRIM37O94972 964 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 ECE1P42892 770 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 MAGOHP61326 146 aaKnown RBP16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 YWHAEP62258 255 aaKnown RBP16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 RAPH1Q70E73 1250 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 SCOCQ9UIL1 159 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 HNRNPDLO14979 420 aaKnown RBP16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 P4HA1P13674 534 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 CTTNQ14247 550 aaKnown RBP16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 SHC4Q6S5L8 630 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 EXOC1LA0A1B0GW35 172 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 SNAP23O00161 211 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 IGBP1P78318 339 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 ANKRD35Q8N283 1001 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 CCPG1Q9ULG6 757 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 PP2D1A8MPX8 630 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 DLGAP5Q15398 846 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 BCAP29Q9UHQ4 241 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
SHROOM4-201ENST00000289292 CCZ1BP86790 482 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 CCZ1P86791 482 aaPredicted RBP16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 CCDC93Q567U6 631 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 RNF207Q6ZRF8 634 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 PDZD8Q8NEN9 1154 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 TXLNGQ9NUQ3 528 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 H0YIN7 160 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 GSTA1P08263 222 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 GSTA2P09210 222 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 PTPREP23469 700 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 IL1RL1Q01638 556 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 MECOMQ03112 1051 aa16.58■□□□□ 0.25
SHROOM4-201ENST00000289292 ZNF408Q9H9D4 720 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms