RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 REXO1L1PQ8IX06 675 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 CPXCR1Q8N123 301 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 SAMD3Q8N6K7 520 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 ZNF280CQ8ND82 737 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 CCDC51Q96ER9 411 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 WRNIP1Q96S55 665 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 HSD17B14Q9BPX1 270 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 MXRA8Q9BRK3 442 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 TUBGCP2Q9BSJ2 902 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 AS3MTQ9HBK9 375 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 PICK1Q9NRD5 415 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 PNMA2Q9UL42 364 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 PCDHA2Q9Y5H9 948 aa10.67□□□□□ -0.7
TRIM55-201ENST00000276573 A0A1W2PQC6 194 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 FRMD3A2A2Y4 597 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 KIF2AO00139 706 aaPredicted RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 NFIBO00712 420 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 MFAP3LO75121 409 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 TPM1P09493 284 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 FXR1P51114 621 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 LRRC63Q05C16 580 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 PPP2R5CQ13362 524 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 TRIM14Q14142 442 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 GIT2Q14161 759 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 HERC4Q5GLZ8 1057 aaPredicted RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 LRCH2Q5VUJ6 765 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 CNGA4Q8IV77 575 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 MYOCDQ8IZQ8 938 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 GLIS3Q8NEA6 775 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 EEF2KMTQ96G04 330 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 ZFP91Q96JP5 570 aaPredicted RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 CNOT6LQ96LI5 555 aaKnown RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 NAA15Q9BXJ9 866 aaKnown RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 SPON1Q9HCB6 807 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 TUFT1Q9NNX1 390 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 RGL1Q9NZL6 768 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 COL20A1Q9P218 1284 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 PPP2R3BQ9Y5P8 575 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 RPTORQ8N122 1335 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 RNF225M0QZC1 329 aaPredicted RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 ZSCAN12O43309 604 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 SLITRK3O94933 977 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 EYA4O95677 639 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 TUBB4AP04350 444 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 KRT18P05783 430 aaKnown RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 FECHP22830 423 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 MTIF2P46199 727 aaKnown RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 PABPC4Q13310 644 aaKnown RBP eCLIP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 MUM1L1Q5H9M0 696 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 SLC30A10Q6XR72 485 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 KLRG1Q96E93 195 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 ZNF577Q9BSK1 485 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 GGA3Q9NZ52 723 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 FZD1Q9UP38 647 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 CTDP1Q9Y5B0 961 aaPredicted RBP10.66□□□□□ -0.7
TRIM55-201ENST00000276573 ZHX2Q9Y6X8 837 aa10.66□□□□□ -0.7
TRIM55-201ENST00000276573 B4DLN1 442 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 C19orf81C9J6K1 198 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 GAS7O60861 476 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 BCRP11274 1271 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 MUTP22033 750 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 GTF2F1P35269 517 aaKnown RBP eCLIP10.65□□□□□ -0.7
TRIM55-201ENST00000276573 SETQ01105 290 aaPredicted RBP10.65□□□□□ -0.7
TRIM55-201ENST00000276573 CYP4A11Q02928 519 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 TBC1D8BQ0IIM8 1120 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 SUPT20HL1Q3ZLR7 823 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 B3GNT9Q6UX72 402 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 NIPA1Q7RTP0 329 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 KRT26Q7Z3Y9 468 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 SYTL5Q8TDW5 730 aaPredicted RBP10.65□□□□□ -0.7
TRIM55-201ENST00000276573 ZNF592Q92610 1267 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 DYDC2Q96IM9 177 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 C12orf42Q96LP6 360 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 TSG101Q99816 390 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 WDR11Q9BZH6 1224 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 TBC1D7Q9P0N9 293 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 PPP2R2CQ9Y2T4 447 aa10.65□□□□□ -0.7
TRIM55-201ENST00000276573 IPO5O00410 1097 aaKnown RBP10.65□□□□□ -0.71
TRIM55-201ENST00000276573 VWA5AO00534 786 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 PES1O00541 588 aaKnown RBP10.65□□□□□ -0.71
TRIM55-201ENST00000276573 DYNC1I1O14576 645 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 ITGB5P18084 799 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 CACNB1Q02641 598 aaPredicted RBP10.65□□□□□ -0.71
TRIM55-201ENST00000276573 RAD51AP2Q09MP3 1159 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 CTTNQ14247 550 aaKnown RBP10.65□□□□□ -0.71
TRIM55-201ENST00000276573 EPHA7Q15375 998 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 ZCWPW2Q504Y3 356 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 MIIPQ5JXC2 388 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 TPH2Q8IWU9 490 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 ATG4CQ96DT6 458 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 TRERF1Q96PN7 1200 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 TAAR1Q96RJ0 339 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 RIT2Q99578 217 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 NOC4LQ9BVI4 516 aaKnown RBP10.65□□□□□ -0.71
TRIM55-201ENST00000276573 FGFBP2Q9BYJ0 223 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 BHMT2Q9H2M3 363 aa10.65□□□□□ -0.71
TRIM55-201ENST00000276573 UBIAD1Q9Y5Z9 338 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms