RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 MS4A14Q96JA4 679 aa13.8□□□□□ -0.2
UBXN4-201ENST00000272638 SCN11AQ9UI33 1791 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 ARFGEF2Q9Y6D5 1785 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 GCOM1H8Y6P7 765 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-201ENST00000272638 NDUFB10O96000 172 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 POLR2MP0CAP2 368 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 TBX2Q13207 712 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-201ENST00000272638 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 SP8Q8IXZ3 490 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 SEMA6BQ9H3T3 888 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 ZNF446Q9NWS9 450 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 ATP6V0A2Q9Y487 856 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 FAM237AA0A1B0GTK4 181 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 TNFAIP3P21580 790 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 ZSCAN26Q16670 478 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 DPH5Q9H2P9 285 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 FAM204AQ9H8W3 233 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 CCPG1Q9ULG6 757 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 CAPN11Q9UMQ6 739 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 ATRNO75882 1429 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 DAAM2Q86T65 1068 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 UBLCP1Q8WVY7 318 aaPredicted RBP13.79□□□□□ -0.2
UBXN4-201ENST00000272638 TCHPQ9BT92 498 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 KBTBD4Q9NVX7 518 aa13.79□□□□□ -0.2
UBXN4-201ENST00000272638 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
UBXN4-201ENST00000272638 ECE1P42892 770 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 KCNB1Q14721 858 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 CERS5Q8N5B7 392 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 BANK1Q8NDB2 785 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 MAGEF1Q9HAY2 307 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 K7ENM7 598 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 FLOT1O75955 427 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 ERLIN2O94905 339 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 SRGNP10124 158 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 STAT2P52630 851 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 CFAP221Q4G0U5 840 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 KIAA0895Q8NCT3 520 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 AFAP1L1Q8TED9 768 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 ZNF577Q9BSK1 485 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 AP1M1Q9BXS5 423 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 FBXO28Q9NVF7 368 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 STK32BQ9NY57 414 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 NMT1P30419 496 aaKnown RBP13.78□□□□□ -0.2
UBXN4-201ENST00000272638 KCNJ6P48051 423 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 RHBDL3P58872 404 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 MIER3Q7Z3K6 550 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 TNFRSF25Q93038 417 aa13.78□□□□□ -0.2
UBXN4-201ENST00000272638 TRIM49P0CI25 452 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 TRIM49CP0CI26 452 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 KRT5P13647 590 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 PLA2G4AP47712 749 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 TTLL12Q14166 644 aaPredicted RBP13.77□□□□□ -0.2
UBXN4-201ENST00000272638 COL23A1Q86Y22 540 aaPredicted RBP13.77□□□□□ -0.2
UBXN4-201ENST00000272638 FAM76AQ8TAV0 307 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 SELENOOQ9BVL4 669 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 EPB41L5Q9HCM4 733 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 GCNT4Q9P109 453 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 CTTNBP2NLQ9P2B4 639 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 ADAM21Q9UKJ8 722 aa13.77□□□□□ -0.2
UBXN4-201ENST00000272638 COL1A1P02452 1464 aaPredicted RBP13.77□□□□□ -0.2
UBXN4-201ENST00000272638 MYL1P05976 194 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 TMEM139Q8IV31 216 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 RIC8AQ9NPQ8 531 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 SHTN1A0MZ66 631 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 PALMO75781 387 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 ADRA2BP18089 450 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 SLC35G1Q2M3R5 365 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 FAM102BQ5T8I3 360 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 ACER1Q8TDN7 264 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 DYDC2Q96IM9 177 aa13.77□□□□□ -0.21
UBXN4-201ENST00000272638 DUSP9Q99956 384 aaKnown RBP13.77□□□□□ -0.21
UBXN4-201ENST00000272638 KIAA0754O94854 1291 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 PRPHP41219 470 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 STAT1P42224 750 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 PSMC6P62333 389 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 GUF1Q8N442 669 aaKnown RBP13.76□□□□□ -0.21
UBXN4-201ENST00000272638 C7orf25Q9BPX7 421 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 GLT8D2Q9H1C3 349 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 FHOD1Q9Y613 1164 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
UBXN4-201ENST00000272638 SLC9A1P19634 815 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
UBXN4-201ENST00000272638 ZC2HC1CQ53FD0 456 aaPredicted RBP13.76□□□□□ -0.21
UBXN4-201ENST00000272638 PRAMEF18Q5VWM3 479 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 GBP6Q6ZN66 633 aa13.76□□□□□ -0.21
UBXN4-201ENST00000272638 TMEM179Q6ZVK1 233 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms