RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 NOX5Q96PH1 765 aa11.9□□□□□ -0.5
CNGA3-201ENST00000272602 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
CNGA3-201ENST00000272602 FRMPD2Q68DX3 1309 aaPredicted RBP11.9□□□□□ -0.5
CNGA3-201ENST00000272602 FAM133BQ5BKY9 247 aaKnown RBP11.9□□□□□ -0.51
CNGA3-201ENST00000272602 DDX42Q86XP3 938 aaKnown RBP eCLIP11.9□□□□□ -0.51
CNGA3-201ENST00000272602 CPXCR1Q8N123 301 aa11.9□□□□□ -0.51
CNGA3-201ENST00000272602 GGT7Q9UJ14 662 aa11.9□□□□□ -0.51
CNGA3-201ENST00000272602 PHRF1Q9P1Y6 1649 aaKnown RBP11.89□□□□□ -0.51
CNGA3-201ENST00000272602 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
CNGA3-201ENST00000272602 CIAO1O76071 339 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 PLS1Q14651 629 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 SPATA20Q8TB22 786 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 RASGRP4Q8TDF6 673 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 STAG1Q8WVM7 1258 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 TEKT1Q969V4 418 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 CNNM2Q9H8M5 875 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 SLC8A1P32418 973 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 LIFRP42702 1097 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 GFPT1Q06210 699 aaPredicted RBP11.89□□□□□ -0.51
CNGA3-201ENST00000272602 KDM7AQ6ZMT4 941 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 CATIPQ7Z7H3 387 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 CCDC50Q8IVM0 306 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 HVCN1Q96D96 273 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 ATP6V0A2Q9Y487 856 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 ATRNO75882 1429 aa11.89□□□□□ -0.51
CNGA3-201ENST00000272602 PLEKHA8P1O95397 391 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 BMP15O95972 392 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 SLC16A2P36021 539 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
CNGA3-201ENST00000272602 SGMS1Q86VZ5 419 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 ELOA2Q8IYF1 753 aaPredicted RBP11.88□□□□□ -0.51
CNGA3-201ENST00000272602 CCDC170Q8IYT3 715 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 UHMK1Q8TAS1 419 aaKnown RBP11.88□□□□□ -0.51
CNGA3-201ENST00000272602 HPS3Q969F9 1004 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 DNAJC7Q99615 494 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 NUP58Q9BVL2 599 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 ACTR5Q9H9F9 607 aaPredicted RBP11.88□□□□□ -0.51
CNGA3-201ENST00000272602 L3MBTL1Q9Y468 752 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 CEP104O60308 925 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 VIMP08670 466 aaKnown RBP11.88□□□□□ -0.51
CNGA3-201ENST00000272602 STK38LQ9Y2H1 464 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 CRYBG1Q9Y4K1 1723 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
CNGA3-201ENST00000272602 ACCSLQ4AC99 568 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 CCDC63Q8NA47 563 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 NSMCE1Q8WV22 266 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 SEC16BQ96JE7 1060 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 MTFR1LQ9H019 292 aa11.88□□□□□ -0.51
CNGA3-201ENST00000272602 TNKSO95271 1327 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 LRRC10BA6NIK2 292 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 HMGB1P1B2RPK0 211 aaPredicted RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 DNM1LO00429 736 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 KCNK3O14649 394 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 MYBL1P10243 752 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 EEF1GP26641 437 aaKnown RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 IFNAR2P48551 515 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 PRPF4BQ13523 1007 aaKnown RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 QPCTQ16769 361 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 MDM1Q8TC05 714 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 STAMBPL1Q96FJ0 436 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 STRBPQ96SI9 672 aaKnown RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 FAM167BQ9BTA0 163 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 YIPF3Q9GZM5 350 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 DPH5Q9H2P9 285 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 HDAC9Q9UKV0 1011 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 LEMD3Q9Y2U8 911 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 CTNND1O60716 968 aaKnown RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 CLSTN1O94985 981 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 MAGOHP61326 146 aaKnown RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 SPRED3Q2MJR0 410 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 MAGOHBQ96A72 148 aaKnown RBP11.87□□□□□ -0.51
CNGA3-201ENST00000272602 CSRNP1Q96S65 589 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 AP1M1Q9BXS5 423 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 PKD2L1Q9P0L9 805 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 CCDC194A0A1B0GVG4 234 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 SCTRP47872 440 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 TNNC1P63316 161 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 IRF2BP1Q8IU81 584 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 ZFPM1Q8IX07 1006 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 TMTC2Q8N394 836 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 DYDC1Q8WWB3 177 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 OSBPL7Q9BZF2 842 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 GOLPH3Q9H4A6 298 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 SH2D4AQ9H788 454 aa11.87□□□□□ -0.51
CNGA3-201ENST00000272602 STK36Q9NRP7 1315 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 ZNF263O14978 683 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 SLC1A4P43007 532 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 CRYMQ14894 314 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 AP1ARQ63HQ0 302 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 DTHD1Q6ZMT9 781 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 ANKS4BQ8N8V4 417 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 CASKIN2Q8WXE0 1202 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 PRMT6Q96LA8 375 aaPredicted RBP11.86□□□□□ -0.51
CNGA3-201ENST00000272602 SLC39A2Q9NP94 309 aa11.86□□□□□ -0.51
CNGA3-201ENST00000272602 SPATS2LQ9NUQ6 558 aaKnown RBP11.86□□□□□ -0.51
CNGA3-201ENST00000272602 CD2APQ9Y5K6 639 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms