RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TCP11X2Q5H9J9 407 aa13.03□□□□□ -0.32
SRRM4-201ENST00000267260 KRT40Q6A162 431 aa13.03□□□□□ -0.32
SRRM4-201ENST00000267260 LMBRD1Q9NUN5 540 aa13.03□□□□□ -0.32
SRRM4-201ENST00000267260 GSNP06396 782 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 BLVRAP53004 296 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 KRT33BQ14525 404 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 RARS2Q5T160 578 aaKnown RBP13.02□□□□□ -0.32
SRRM4-201ENST00000267260 TEKT3Q9BXF9 490 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 VPS54Q9P1Q0 977 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 DIS3Q9Y2L1 958 aaKnown RBP13.02□□□□□ -0.32
SRRM4-201ENST00000267260 EYA2O00167 538 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 RASSF7Q02833 373 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 SPARCL1Q14515 664 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 CEP78Q5JTW2 689 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 CENPUQ71F23 418 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 HDDC2Q7Z4H3 204 aa13.02□□□□□ -0.32
SRRM4-201ENST00000267260 TRMT44Q8IYL2 757 aaKnown RBP13.02□□□□□ -0.32
SRRM4-201ENST00000267260 SYT2Q8N9I0 419 aaPredicted RBP13.02□□□□□ -0.32
SRRM4-201ENST00000267260 MMEP08473 750 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 S100A5P33763 92 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 PABPC4Q13310 644 aaKnown RBP eCLIP13.02□□□□□ -0.33
SRRM4-201ENST00000267260 TAF1BQ53T94 588 aaPredicted RBP13.02□□□□□ -0.33
SRRM4-201ENST00000267260 NOP9Q86U38 636 aaKnown RBP13.02□□□□□ -0.33
SRRM4-201ENST00000267260 EPB41L5Q9HCM4 733 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 PODXLO00592 558 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 EPAS1Q99814 870 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 MAST1Q9Y2H9 1570 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 ZNF263O14978 683 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 TECP42680 631 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 ACAD11Q709F0 780 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 PARD3Q8TEW0 1356 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 hCG_2014768A0A024R1R8 64 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 HOXB7P09629 217 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 ADAM9Q13443 819 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 TRIM67Q6ZTA4 783 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 METTL23Q86XA0 190 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 OTUB1Q96FW1 271 aaPredicted RBP13.02□□□□□ -0.33
SRRM4-201ENST00000267260 DHTKD1Q96HY7 919 aaPredicted RBP13.02□□□□□ -0.33
SRRM4-201ENST00000267260 ATG3Q9NT62 314 aa13.02□□□□□ -0.33
SRRM4-201ENST00000267260 CIITAP33076 1130 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 GNL1P36915 607 aaPredicted RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 MYSM1Q5VVJ2 828 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 UHMK1Q8TAS1 419 aaKnown RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 ZMYND12Q9H0C1 365 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 C10orf88Q9H8K7 445 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 MLXIPQ9HAP2 919 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 NPATQ14207 1427 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 CMA1P23946 247 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 ARL4AP40617 200 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 C1orf146Q5VVC0 180 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 BEGAINQ9BUH8 593 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 PFKFB1P16118 471 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 KIF9Q9HAQ2 790 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 TFCP2L1Q9NZI6 479 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 TCIRG1Q13488 830 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 ANGPTL8Q6UXH0 198 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 PSMC2P35998 433 aaKnown RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 ARL13BQ3SXY8 428 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 SPATA5Q8NB90 893 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 ABCC12Q96J65 1359 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 UGGT2Q9NYU1 1516 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 KRT87PA6NCN2 255 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 YWHAHQ04917 246 aaPredicted RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 MESDQ14696 234 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 KHDRBS2Q5VWX1 349 aaKnown RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 SPOPLQ6IQ16 392 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 RAPGEF5Q92565 580 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 CNOT6LQ96LI5 555 aaKnown RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 NT5C1BQ96P26 610 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 CCDC90BQ9GZT6 254 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 SEPT3Q9UH03 358 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 WDR17Q8IZU2 1322 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
SRRM4-201ENST00000267260 SMCR8Q8TEV9 937 aaPredicted RBP13.01□□□□□ -0.33
SRRM4-201ENST00000267260 PLS3P13797 630 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 FBXW4P57775 412 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 MORF4L2Q15014 288 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 E7EWF7 191 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 POLR2MP0CAP2 368 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 AP1B1Q10567 949 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 WDR75Q8IWA0 830 aaKnown RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 SNX19Q92543 992 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 OPTNQ96CV9 577 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 WDR64B1ANS9 1081 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 TJP3O95049 919 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 DEFA1P59665 94 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 DEFA3P59666 94 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 DARS2Q6PI48 645 aaKnown RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 SNX25Q9H3E2 840 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 DENND4BO75064 1496 aaPredicted RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 CAV1Q03135 178 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 CAPRIN1Q14444 709 aaKnown RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 XKR9Q5GH70 373 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 ZSCAN10Q96SZ4 725 aaPredicted RBP13□□□□□ -0.33
SRRM4-201ENST00000267260 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
SRRM4-201ENST00000267260 ITM2BQ9Y287 266 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms