RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 LACRTQ9GZZ8 138 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 MMRN2Q9H8L6 949 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PI4KBQ9UBF8 816 aa14.31□□□□□ -0.12
CPSF6-201ENST00000266679 PSMD14O00487 310 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 IKQ13123 557 aaPredicted RBP14.3□□□□□ -0.12
CPSF6-201ENST00000266679 BRD3Q15059 726 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 TERF2Q15554 542 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 FAM26FQ5R3K3 315 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 STRIP1Q5VSL9 837 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 MKL1Q969V6 931 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 FGFBP2Q9BYJ0 223 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 POTEB2H3BUK9 544 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 ATP8B1O43520 1251 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 KRT86O43790 486 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 PLA2G4BP0C869 781 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 RAD51AP2Q09MP3 1159 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 AOC3Q16853 763 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 LONRF2Q1L5Z9 754 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 USH1GQ495M9 461 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 HYIQ5T013 277 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 TRAPPC11Q7Z392 1133 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 GPBP1Q86WP2 473 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 SIAH1Q8IUQ4 282 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 MSANTD4Q8NCY6 345 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 IDI2Q9BXS1 227 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 TANGO6Q9C0B7 1094 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 NT5C3AQ9H0P0 336 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 GLT8D2Q9H1C3 349 aa14.3□□□□□ -0.12
CPSF6-201ENST00000266679 ABCB11O95342 1321 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 CCDC151A5D8V7 595 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 ABCB5Q2M3G0 1257 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 KRT26Q7Z3Y9 468 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 LARGE2Q8N3Y3 721 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 NOA1Q8NC60 698 aaKnown RBP14.29□□□□□ -0.12
CPSF6-201ENST00000266679 CCDC42Q96M95 316 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 KCNMB3Q9NPA1 279 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 BMP2KQ9NSY1 1161 aaPredicted RBP14.29□□□□□ -0.12
CPSF6-201ENST00000266679 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 MACROD2A1Z1Q3 448 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 FZD9O00144 591 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 MEIS2O14770 477 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 POLR3GO15318 223 aaPredicted RBP14.29□□□□□ -0.12
CPSF6-201ENST00000266679 SRGAP2O75044 1071 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 MED24O75448 989 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 ARHGAP4P98171 946 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 CCDC40Q4G0X9 1142 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 EAPPQ56P03 285 aaPredicted RBP14.29□□□□□ -0.12
CPSF6-201ENST00000266679 TATDN1Q6P1N9 297 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 TMEM179Q6ZVK1 233 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 CCDC65Q8IXS2 484 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 CCDC155Q8N6L0 562 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 IQCDQ96DY2 449 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 P2RX7Q99572 595 aaKnown RBP14.29□□□□□ -0.12
CPSF6-201ENST00000266679 FUT8Q9BYC5 575 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
CPSF6-201ENST00000266679 DUSP10Q9Y6W6 482 aa14.29□□□□□ -0.12
CPSF6-201ENST00000266679 POTEFA5A3E0 1075 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 F5H6K3 240 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 TRAF5O00463 557 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 ZNF263O14978 683 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 NDUFB10O96000 172 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 USP11P51784 963 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 VAV2P52735 878 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 FKBP1AP62942 108 aaKnown RBP14.28□□□□□ -0.12
CPSF6-201ENST00000266679 CDK17Q00537 523 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 KLRC3Q07444 240 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 SPA17Q15506 151 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 ZCWPW2Q504Y3 356 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 PRR16Q569H4 304 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 POTEGQ6S5H5 508 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 POTEEQ6S8J3 1075 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 ZNF662Q6ZS27 426 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 RRAGAQ7L523 313 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 EHBP1Q8NDI1 1231 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 SMCR8Q8TEV9 937 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-201ENST00000266679 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 CAPZA3Q96KX2 299 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
CPSF6-201ENST00000266679 ARHGAP20Q9P2F6 1191 aa14.28□□□□□ -0.12
CPSF6-201ENST00000266679 LRRC53A6NM62 1247 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 PPIP5K2O43314 1243 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 KRT18P05783 430 aaKnown RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 OAS2P29728 719 aaKnown RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 EIF4A3P38919 411 aaKnown RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 JAG1P78504 1218 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 AP3B2Q13367 1082 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 SYDE2Q5VT97 1194 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 NEK11Q8NG66 645 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 L3MBTL3Q96JM7 780 aaPredicted RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 AMNQ9BXJ7 453 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 DEF6Q9H4E7 631 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 ZHX3Q9H4I2 956 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 TAF1DQ9H5J8 278 aaPredicted RBP14.27□□□□□ -0.12
CPSF6-201ENST00000266679 RAB21Q9UL25 225 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 COL4A3BPQ9Y5P4 624 aa14.27□□□□□ -0.12
CPSF6-201ENST00000266679 SAR1BQ9Y6B6 198 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms