RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MKRN4PQ13434 485 aaPredicted RBP18.52■□□□□ 0.56
SQLE-201ENST00000265896 IQCEQ6IPM2 695 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 FNBP4Q8N3X1 1017 aaPredicted RBP18.52■□□□□ 0.56
SQLE-201ENST00000265896 DAGLBQ8NCG7 672 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 KAT2BQ92831 832 aa18.52■□□□□ 0.56
SQLE-201ENST00000265896 KLHL30Q0D2K2 578 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 LLGL1Q15334 1064 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 FAM26FQ5R3K3 315 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 HAS1Q92839 578 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 RNPC3Q96LT9 517 aaKnown RBP18.51■□□□□ 0.55
SQLE-201ENST00000265896 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.51■□□□□ 0.553e-9■□□□□ 9.5
SQLE-201ENST00000265896 PABPC4Q13310 644 aaKnown RBP eCLIP18.51■□□□□ 0.552e-8■■■□□ 14.7
SQLE-201ENST00000265896 CHADLQ6NUI6 762 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 GPBP1Q86WP2 473 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 CASKIN2Q8WXE0 1202 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 PCDHA12Q9UN75 941 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 ZNF233A6NK53 670 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 LAD1O00515 517 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 EBAG9O00559 213 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 CLIC2O15247 247 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 ATP2C2O75185 946 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 KCNA1Q09470 495 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 TCP10Q12799 353 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 SLC9C1Q4G0N8 1177 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 KSR1Q8IVT5 923 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 ADGRF4Q8IZF3 695 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 MMGT1Q8N4V1 131 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 RPGRIP1Q96KN7 1286 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 SPZ1Q9BXG8 430 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 CD209Q9NNX6 404 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 PCDHAC2Q9Y5I4 1007 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 COL4A3BPQ9Y5P4 624 aa18.51■□□□□ 0.55
SQLE-201ENST00000265896 GRIN2DO15399 1336 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 RAD51CO43502 376 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 TCP1P17987 556 aaKnown RBP18.5■□□□□ 0.55
SQLE-201ENST00000265896 CFAP58Q5T655 872 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 CCDC84Q86UT8 332 aaPredicted RBP18.5■□□□□ 0.55
SQLE-201ENST00000265896 TSG101Q99816 390 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 TSPYL1Q9H0U9 437 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 CCNL1Q9UK58 526 aaPredicted RBP18.5■□□□□ 0.55
SQLE-201ENST00000265896 CEP104O60308 925 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 ADAM9Q13443 819 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 CFAP221Q4G0U5 840 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 NEDD1Q8NHV4 660 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 C8orf37Q96NL8 207 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 LRRC4CQ9HCJ2 640 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 PPANQ9NQ55 473 aaKnown RBP18.5■□□□□ 0.55
SQLE-201ENST00000265896 CHORDC1Q9UHD1 332 aaPredicted RBP18.5■□□□□ 0.55
SQLE-201ENST00000265896 NARFQ9UHQ1 456 aa18.5■□□□□ 0.55
SQLE-201ENST00000265896 MYL1P05976 194 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 RFC4P35249 363 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 USH1GQ495M9 461 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 GUF1Q8N442 669 aaKnown RBP18.49■□□□□ 0.55
SQLE-201ENST00000265896 DDX47Q9H0S4 455 aaKnown RBP18.49■□□□□ 0.55
SQLE-201ENST00000265896 DDX4Q9NQI0 724 aaKnown RBP18.49■□□□□ 0.55
SQLE-201ENST00000265896 A0A1W2PQJ5 194 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 RSPH10B2B2RC85 870 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 RSPH10BP0C881 870 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 CEP85LQ5SZL2 805 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 DNAJC19Q96DA6 116 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 CUEDC2Q9H467 287 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 JMJD4Q9H9V9 463 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 SNED1Q8TER0 1413 aa18.49■□□□□ 0.55
SQLE-201ENST00000265896 EPHB4P54760 987 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 PTK2Q05397 1052 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 C16orf86Q6ZW13 317 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 ZNF804AQ7Z570 1209 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 NYXQ9GZU5 481 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 FKBP3Q00688 224 aaKnown RBP18.48■□□□□ 0.55
SQLE-201ENST00000265896 PPFIA1Q13136 1202 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 ASTE1Q2TB18 679 aaPredicted RBP18.48■□□□□ 0.55
SQLE-201ENST00000265896 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 RNF187Q5TA31 235 aaPredicted RBP18.48■□□□□ 0.55
SQLE-201ENST00000265896 GALNT17Q6IS24 598 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 AJAP1Q9UKB5 411 aaPredicted RBP18.48■□□□□ 0.55
SQLE-201ENST00000265896 EIF3HO15372 352 aaKnown RBP eCLIP18.48■□□□□ 0.551e-6■■□□□ 13.6
SQLE-201ENST00000265896 ITGA4P13612 1032 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 FLT3P36888 993 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 RHBDL3P58872 404 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 PDE4CQ08493 712 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 DOK7Q18PE1 504 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 SCFD1Q8WVM8 642 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 ANKS1AQ92625 1134 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 SPAG5Q96R06 1193 aa18.48■□□□□ 0.55
SQLE-201ENST00000265896 MYO1FO00160 1098 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 RPS6KA5O75582 802 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 PLA2G4BP0C869 781 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 NR2F2P24468 414 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 TADA2BQ86TJ2 420 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 CNBD1Q8NA66 436 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 CELF4Q9BZC1 486 aaKnown RBP18.47■□□□□ 0.55
SQLE-201ENST00000265896 ABCA3Q99758 1704 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 SHTN1A0MZ66 631 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 GRID2IPA4D2P6 1211 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 CASP4P49662 377 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 KCNH2Q12809 1159 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 PRPF4BQ13523 1007 aaKnown RBP18.47■□□□□ 0.55
SQLE-201ENST00000265896 ZFPM1Q8IX07 1006 aa18.47■□□□□ 0.55
SQLE-201ENST00000265896 RPGRQ92834 1020 aaKnown RBP18.47■□□□□ 0.55
SQLE-201ENST00000265896 DPH5Q9H2P9 285 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms