RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 RCOR1Q9UKL0 485 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 THAP12O43422 761 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 MYL1P05976 194 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 MCF2P10911 925 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 GJC1P36383 396 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 PLCD1P51178 756 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 LRRC36Q1X8D7 754 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 MMEL1Q495T6 779 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 C1orf146Q5VVC0 180 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 DHX40Q8IX18 779 aaKnown RBP11.54□□□□□ -0.56
KPNA3-201ENST00000261667 AGGF1Q8N302 714 aaeCLIP11.54□□□□□ -0.56
KPNA3-201ENST00000261667 PDZD8Q8NEN9 1154 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 ARL8AQ96BM9 186 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 FAM161BQ96MY7 647 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 ZIM3Q96PE6 472 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 HAUS8Q9BT25 410 aa11.54□□□□□ -0.56
KPNA3-201ENST00000261667 TRPM3Q9HCF6 1732 aaPredicted RBP11.54□□□□□ -0.56
KPNA3-201ENST00000261667 DLG5Q8TDM6 1919 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 E7ENQ6 273 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 M0R2C6 588 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ARHGEF9O43307 516 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 RASSF7Q02833 373 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 LRRC14Q15048 493 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 TRIM16LQ309B1 348 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 TMTC3Q6ZXV5 915 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 TMTC2Q8N394 836 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 FMO2Q99518 471 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 DMAP1Q9NPF5 467 aaPredicted RBP11.53□□□□□ -0.56
KPNA3-201ENST00000261667 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 BABAM1Q9NWV8 329 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 NDUFA13Q9P0J0 144 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 AMOTL2Q9Y2J4 779 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 POTEFA5A3E0 1075 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 LDHAP00338 332 aaKnown RBP11.53□□□□□ -0.56
KPNA3-201ENST00000261667 C8orf58Q8NAV2 365 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ICA1LQ8NDH6 482 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 LRGUKQ96M69 825 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 RPS6KC1Q96S38 1066 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ANKRD2Q9GZV1 360 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 DDX18Q9NVP1 670 aaKnown RBP11.53□□□□□ -0.56
KPNA3-201ENST00000261667 GID8Q9NWU2 228 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ITM2BQ9Y287 266 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ARL2BPQ9Y2Y0 163 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 PCP4L1A6NKN8 68 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 MOCS3O95396 460 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ALOX15P16050 662 aaPredicted RBP11.53□□□□□ -0.56
KPNA3-201ENST00000261667 KCNA2P16389 499 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 SERPINB8P50452 374 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 KLHL30Q0D2K2 578 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 PPP2R5EQ16537 467 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 CC2D2BQ6DHV5 1058 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ANKRD35Q8N283 1001 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ATL2Q8NHH9 583 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 EPAS1Q99814 870 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 LRRC1Q9BTT6 524 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 ZFP69BQ9UJL9 534 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 USP31Q70CQ4 1352 aa11.53□□□□□ -0.56
KPNA3-201ENST00000261667 MFAP3LO75121 409 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 IDH1O75874 414 aaKnown RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 ZWINTO95229 277 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 CUL1Q13616 776 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 RFWD2Q8NHY2 731 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 VPS37BQ9H9H4 285 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 LRWD1Q9UFC0 647 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 USP15Q9Y4E8 981 aaPredicted RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 KIAA0232Q92628 1395 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 MAP2K7O14733 419 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 SPOPO43791 374 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 S100A1P23297 94 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 EEF1B2P24534 225 aaKnown RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 TMEM132AQ24JP5 1023 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 KDM7AQ6ZMT4 941 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 RGS9BPQ6ZS82 235 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 RSRC2Q7L4I2 434 aaKnown RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 SESTD1Q86VW0 696 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 PGBD1Q96JS3 809 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 XPO6Q96QU8 1125 aaKnown RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 ZMYND12Q9H0C1 365 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 TMEM60Q9H2L4 133 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 RABL2AQ9UBK7 228 aaPredicted RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 TBK1Q9UHD2 729 aa11.52□□□□□ -0.56
KPNA3-201ENST00000261667 TRPC5Q9UL62 973 aaPredicted RBP11.52□□□□□ -0.56
KPNA3-201ENST00000261667 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.57
KPNA3-201ENST00000261667 COPB1P53618 953 aaKnown RBP11.52□□□□□ -0.57
KPNA3-201ENST00000261667 ACCSLQ4AC99 568 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 MRPL44Q9H9J2 332 aaKnown RBP11.52□□□□□ -0.57
KPNA3-201ENST00000261667 ABCC4O15439 1325 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 FESP07332 822 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 ATP6V1B1P15313 513 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 IL13P35225 146 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 DNM2P50570 870 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 COPS2P61201 443 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 MYBPC2Q14324 1141 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 UBE2Q1Q7Z7E8 422 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 PATL1Q86TB9 770 aaKnown RBP11.52□□□□□ -0.57
KPNA3-201ENST00000261667 TSNARE1Q96NA8 513 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 SPATA7Q9P0W8 599 aa11.52□□□□□ -0.57
KPNA3-201ENST00000261667 HDAC9Q9UKV0 1011 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms