RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 TUBB6Q9BUF5 446 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 RETREG1Q9H6L5 497 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 PIH1D3Q9NQM4 214 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 HNRNPCL2B2RXH8 293 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 H0Y3Z8 333 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 HNRNPCL1O60812 293 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 OCM2P0CE71 109 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 OCMP0CE72 109 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 PRKACBP22694 351 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 HOXC9P31274 260 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 KRI1Q8N9T8 703 aaKnown RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 FSD1Q9BTV5 496 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TRPV6Q9H1D0 765 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 DBF4Q9UBU7 674 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 TTC7AQ9ULT0 858 aaPredicted RBP7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 PLAAQ9Y263 795 aa7.3□□□□□ -1.24
PDGFRA-201ENST00000257290 DCTN3O75935 186 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 TRIM27P14373 513 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 PRKG1Q13976 671 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 MTHFD1LQ6UB35 978 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 MPRIPQ6WCQ1 1025 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SLC7A5P2Q9GIP4 190 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 NRBP1Q9UHY1 535 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SETBP1Q9Y6X0 1596 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 DEAF1O75398 565 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 PRKACAP17612 351 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SERPINB1P30740 379 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 GGCXP38435 758 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 LAMC2Q13753 1193 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ZCCHC8Q6NZY4 707 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 CNGA4Q8IV77 575 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 DDX20Q9UHI6 824 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ARHGEF10O15013 1369 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 AKR1B15C9JRZ8 316 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ALDH1L1O75891 902 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 RRM1P23921 792 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 IRGCQ6NXR0 463 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 HORMAD1Q86X24 394 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 MTMR9Q96QG7 549 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SELENOOQ9BVL4 669 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SLC39A2Q9NP94 309 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SEPT3Q9UH03 358 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ZNF229Q9UJW7 825 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 LRRIQ4A6NIV6 560 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 GNB5O14775 395 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 TSPAN1O60635 241 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SEMA3DO95025 777 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ACAP2Q15057 778 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 KCTD21Q4G0X4 260 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ZCWPW2Q504Y3 356 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 ZGPATQ8N5A5 531 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 GDAP1Q8TB36 358 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 IP6K1Q92551 441 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 CLSTN2Q9H4D0 955 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 PARVAQ9NVD7 372 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 STK39Q9UEW8 545 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 MAFFQ9ULX9 164 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 TMEM98Q9Y2Y6 226 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 HBS1LQ9Y450 684 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 CEP152O94986 1710 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 RANBP6O60518 1105 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 PPP1R37O75864 691 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SMARCA1P28370 1054 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 LMOD1P29536 600 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 CTNNA1P35221 906 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 PMS1P54277 932 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 MRPS27Q92552 414 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 GLMNQ92990 594 aa7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 SCAF8Q9UPN6 1271 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-201ENST00000257290 NPHP4O75161 1426 aaPredicted RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 IDEP14735 1019 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 LTKP29376 864 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 IL13P35225 146 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 NSUN2Q08J23 767 aaKnown RBP eCLIP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 SGO2Q562F6 1265 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 USP37Q86T82 979 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 CNNM2Q9H8M5 875 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 WBP11Q9Y2W2 641 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 CNOT3O75175 753 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 TRIM16O95361 564 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 PARNO95453 639 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 CACNA2D1P54289 1103 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 PDCD4Q53EL6 469 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 FSCBQ5H9T9 825 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 ANKRD20A3Q5VUR7 823 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 MCF2L2Q86YR7 1114 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 AFAP1L2Q8N4X5 818 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 HNRNPLLQ8WVV9 542 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 CCT8L2Q96SF2 557 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 TRIM39Q9HCM9 518 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 SAR1BQ9Y6B6 198 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 A2ML1A8K2U0 1454 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 METP08581 1390 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 FAM83GA6ND36 823 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 CTNND1O60716 968 aaKnown RBP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 ZC3H11AO75152 810 aaKnown RBP eCLIP7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 PEX5P50542 639 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 UBXN1Q04323 297 aa7.28□□□□□ -1.24
PDGFRA-201ENST00000257290 SF3A3Q12874 501 aaKnown RBP eCLIP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms