RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 PDHBP11177 359 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 MEA1Q16626 185 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 RBM26Q5T8P6 1007 aaKnown RBP12.47□□□□□ -0.41
PDE6B-201ENST00000255622 JAKMIP2Q96AA8 810 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 HINFPQ9BQA5 517 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 LRRC4BQ9NT99 713 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 PSMD14O00487 310 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 CPP00450 1065 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 CALCRLQ16602 461 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 UBE2SQ16763 222 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 PNMA5Q96PV4 448 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 HAUS4Q9H6D7 363 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 ZNF287Q9HBT7 754 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 FAM207AQ9NSI2 230 aaPredicted RBP12.47□□□□□ -0.41
PDE6B-201ENST00000255622 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 L1RE1Q9UN81 338 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 ZNF263O14978 683 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 ZMYND10O75800 440 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 LRRC41Q15345 812 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 THEMIS2Q5TEJ8 643 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 KCNK18Q7Z418 384 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 HNRNPLLQ8WVV9 542 aaKnown RBP12.46□□□□□ -0.41
PDE6B-201ENST00000255622 CUEDC2Q9H467 287 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 LRWD1Q9UFC0 647 aa12.46□□□□□ -0.41
PDE6B-201ENST00000255622 BICDL2A1A5D9 508 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 RPSAP08865 295 aaKnown RBP12.46□□□□□ -0.42
PDE6B-201ENST00000255622 AKR1B1P15121 316 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 SAAL1Q96ER3 474 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 CALML4Q96GE6 196 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 MTMR9Q96QG7 549 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 MXD3Q9BW11 206 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 MCM8Q9UJA3 840 aa12.46□□□□□ -0.42
PDE6B-201ENST00000255622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 RIMBP2O15034 1052 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 IDEP14735 1019 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 IL1R1P14778 569 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 MAGEA10P43363 369 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 TUBB2AQ13885 445 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 ECM1Q16610 540 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 HDXQ7Z353 690 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 TAX1BP1Q86VP1 789 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 CCDC155Q8N6L0 562 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 GDAP1L1Q96MZ0 367 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 TUBB2BQ9BVA1 445 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 TSGA10Q9BZW7 698 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 LRRIQ3A6PVS8 624 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 C6orf229H3BNL8 230 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 PHACTR2O75167 634 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 TNNI2P48788 182 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 ZBED6P86452 979 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 ACTN3Q08043 901 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 LAMB3Q13751 1172 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 DPP8Q6V1X1 898 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 SV2BQ7L1I2 683 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 B4GALNT2Q8NHY0 566 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 NOC3LQ8WTT2 800 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 CCDC47Q96A33 483 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 PHACTR1Q9C0D0 580 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 SAR1BQ9Y6B6 198 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 PPP1R11O60927 126 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 KIF4AO95239 1232 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 NEFHP12036 1026 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 SLC16A2P36021 539 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 GTF2IP78347 998 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 CASP8Q14790 479 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 CNNM4Q6P4Q7 775 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 GSPT2Q8IYD1 628 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 IQCGQ9H095 443 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 RIOX1Q9H6W3 641 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 DDX4Q9NQI0 724 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 ZNHIT6Q9NWK9 470 aaKnown RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 MTMR4Q9NYA4 1195 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.45□□□□□ -0.42
PDE6B-201ENST00000255622 DAGLAQ9Y4D2 1042 aa12.45□□□□□ -0.42
PDE6B-201ENST00000255622 POTEB2H3BUK9 544 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 SMAPO00193 183 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 PDE2AO00408 941 aaPredicted RBP12.44□□□□□ -0.42
PDE6B-201ENST00000255622 ERLIN1O75477 346 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 CYLC1P35663 651 aaPredicted RBP12.44□□□□□ -0.42
PDE6B-201ENST00000255622 SCNN1BP51168 640 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 KRT83P78385 493 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 SLC5A9Q2M3M2 681 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 SAPCD2Q86UD0 394 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 ZSCAN29Q8IWY8 852 aaPredicted RBP12.44□□□□□ -0.42
PDE6B-201ENST00000255622 TBC1D16Q8TBP0 767 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 LARP4BQ92615 738 aaKnown RBP12.44□□□□□ -0.42
PDE6B-201ENST00000255622 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 ADCY7P51828 1080 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 AMPD3Q01432 767 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 CENPPQ6IPU0 288 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 C2CD5Q86YS7 1000 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 SNX29Q8TEQ0 813 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 EZH1Q92800 747 aaPredicted RBP12.44□□□□□ -0.42
PDE6B-201ENST00000255622 CDK5RAP3Q96JB5 506 aa12.44□□□□□ -0.42
PDE6B-201ENST00000255622 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
PDE6B-201ENST00000255622 KRT86O43790 486 aa12.43□□□□□ -0.42
PDE6B-201ENST00000255622 TMEM110Q86TL2 294 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms