RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 BTBD7Q9P203 1132 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 FRMPD4Q14CM0 1322 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 CXCL11O14625 94 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 GAS7O60861 476 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 FCER1AP12319 257 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 CDC25BP30305 580 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 PSMC6P62333 389 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 SETQ01105 290 aaPredicted RBP21.12■□□□□ 0.97
TRIM47-201ENST00000254816 PPIL2Q13356 520 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 ARHGEF16Q5VV41 709 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 SAMD3Q8N6K7 520 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 PROCA1Q8NCQ7 364 aaPredicted RBP21.12■□□□□ 0.97
TRIM47-201ENST00000254816 CACTINQ8WUQ7 758 aaKnown RBP21.12■□□□□ 0.97
TRIM47-201ENST00000254816 EIF2AK1Q9BQI3 630 aaKnown RBP21.12■□□□□ 0.97
TRIM47-201ENST00000254816 EXOC1Q9NV70 894 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 RABGAP1Q9Y3P9 1069 aa21.12■□□□□ 0.97
TRIM47-201ENST00000254816 DDX39AO00148 427 aaKnown RBP21.11■□□□□ 0.97
TRIM47-201ENST00000254816 GJA5P36382 358 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 DDX12PQ92771 950 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 PDCD2LQ9BRP1 358 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 ACAD9Q9H845 621 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 KCNH7Q9NS40 1196 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 KCNH4Q9UQ05 1017 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 IPO5O00410 1097 aaKnown RBP21.11■□□□□ 0.97
TRIM47-201ENST00000254816 PLA2G4BP0C869 781 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 RPA1P27694 616 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 ARID5BQ14865 1188 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 TKFCQ3LXA3 575 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 LBX2Q6XYB7 198 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 GIMAP8Q8ND71 665 aaPredicted RBP21.11■□□□□ 0.97
TRIM47-201ENST00000254816 NELFBQ8WX92 580 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 A1CFQ9NQ94 594 aaKnown RBP21.11■□□□□ 0.97
TRIM47-201ENST00000254816 UBIAD1Q9Y5Z9 338 aa21.11■□□□□ 0.97
TRIM47-201ENST00000254816 SERPINC1P01008 464 aa21.1■□□□□ 0.97
TRIM47-201ENST00000254816 HOXA7P31268 230 aaPredicted RBP21.1■□□□□ 0.97
TRIM47-201ENST00000254816 STK4Q13043 487 aa21.1■□□□□ 0.97
TRIM47-201ENST00000254816 CT47A1Q5JQC4 288 aaPredicted RBP21.1■□□□□ 0.97
TRIM47-201ENST00000254816 LDLRAD1Q5T700 205 aa21.1■□□□□ 0.97
TRIM47-201ENST00000254816 UNC45AQ9H3U1 944 aa21.1■□□□□ 0.97
TRIM47-201ENST00000254816 IDEP14735 1019 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 IRX3P78415 501 aaPredicted RBP21.09■□□□□ 0.97
TRIM47-201ENST00000254816 PPP2R5CQ13362 524 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 MOGSQ13724 837 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 CTTNQ14247 550 aaKnown RBP21.09■□□□□ 0.97
TRIM47-201ENST00000254816 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
TRIM47-201ENST00000254816 SPATA1Q5VX52 437 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 PAGR1Q9BTK6 254 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 ASCC2Q9H1I8 757 aaPredicted RBP21.09■□□□□ 0.97
TRIM47-201ENST00000254816 CYP39A1Q9NYL5 469 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 DOCK5Q9H7D0 1870 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 NPHP3-ACAD11A0A0J9YXS1 232 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 TRIM49BA6NDI0 452 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 ZNF18P17022 549 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 CACNB1Q02641 598 aaPredicted RBP21.09■□□□□ 0.97
TRIM47-201ENST00000254816 PAK1Q13153 545 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 ADSSL1Q8N142 457 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 CCDC47Q96A33 483 aaKnown RBP21.09■□□□□ 0.97
TRIM47-201ENST00000254816 DYDC2Q96IM9 177 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 TEKT3Q9BXF9 490 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 JADE2Q9NQC1 790 aa21.09■□□□□ 0.97
TRIM47-201ENST00000254816 CDK11BP21127 795 aaKnown RBP21.08■□□□□ 0.97
TRIM47-201ENST00000254816 RAD51AP2Q09MP3 1159 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 MTMR1Q13613 665 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 PTPN21Q16825 1174 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 UNC13DQ70J99 1090 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 SLC39A2Q9NP94 309 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 RWDD2AQ9UIY3 292 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 AGTPBP1Q9UPW5 1226 aa21.08■□□□□ 0.97
TRIM47-201ENST00000254816 TESPA1A2RU30 521 aaPredicted RBP21.08■□□□□ 0.96
TRIM47-201ENST00000254816 SLC26A4O43511 780 aa21.08■□□□□ 0.96
TRIM47-201ENST00000254816 UBASH3AP57075 661 aa21.08■□□□□ 0.96
TRIM47-201ENST00000254816 PABPC4Q13310 644 aaKnown RBP eCLIP21.08■□□□□ 0.96
TRIM47-201ENST00000254816 MYRIPQ8NFW9 859 aa21.08■□□□□ 0.96
TRIM47-201ENST00000254816 DNAJC19Q96DA6 116 aa21.08■□□□□ 0.96
TRIM47-201ENST00000254816 SLC10A4Q96EP9 437 aa21.08■□□□□ 0.96
TRIM47-201ENST00000254816 POLR3CQ9BUI4 534 aaPredicted RBP21.08■□□□□ 0.96
TRIM47-201ENST00000254816 AGO4Q9HCK5 861 aaKnown RBP21.08■□□□□ 0.96
TRIM47-201ENST00000254816 BCRP11274 1271 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 PMS1P54277 932 aaKnown RBP21.07■□□□□ 0.96
TRIM47-201ENST00000254816 SLC12A3P55017 1021 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 ITGB3BPQ13352 177 aaPredicted RBP21.07■□□□□ 0.96
TRIM47-201ENST00000254816 FILIP1Q7Z7B0 1213 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 GPBP1Q86WP2 473 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 TPH2Q8IWU9 490 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 KIAA0895Q8NCT3 520 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 SLITRK3O94933 977 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 HERVK_113P62684 666 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 TPD52L1Q16890 204 aaPredicted RBP21.07■□□□□ 0.96
TRIM47-201ENST00000254816 NIPA1Q7RTP0 329 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 TSC1Q92574 1164 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 HSD17B14Q9BPX1 270 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 LRRC27Q9C0I9 530 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 R3HDMLQ9H3Y0 253 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 DNM3Q9UQ16 869 aa21.07■□□□□ 0.96
TRIM47-201ENST00000254816 DYNC1I1O14576 645 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 DHX15O43143 795 aaKnown RBP21.06■□□□□ 0.96
TRIM47-201ENST00000254816 RRP9O43818 475 aaKnown RBP21.06■□□□□ 0.96
TRIM47-201ENST00000254816 NR3C2P08235 984 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 CYP11B2P19099 503 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 MKRN3Q13064 507 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms