RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 NPM3O75607 178 aaKnown RBP21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 KIF20AO95235 890 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEIP0CG38 1075 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 PRR16Q569H4 304 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 ARSHQ5FYA8 562 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEGQ6S5H5 508 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 POTEEQ6S8J3 1075 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 MOXD1Q6UVY6 613 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 NELFCDQ8IXH7 590 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 GMCL1P1Q8NEA9 526 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 SMCR8Q8TEV9 937 aaPredicted RBP21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 ABCB6Q9NP58 842 aa21.64■■□□□ 1.06
CDC42EP1-201ENST00000249014 EIF4A3P38919 411 aaKnown RBP21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 KIF11P52732 1056 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 SLC12A3P55017 1021 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 KIF5AQ12840 1032 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 RRP1BQ14684 758 aaKnown RBP21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 SPA17Q15506 151 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 CCDC65Q8IXS2 484 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 SLFN12Q8IYM2 578 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 LENG9Q96B70 501 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 TANGO6Q9C0B7 1094 aa21.64■■□□□ 1.05
CDC42EP1-201ENST00000249014 POLR3GO15318 223 aaPredicted RBP21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 OAS2P29728 719 aaKnown RBP21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 AOC3Q16853 763 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 HERC4Q5GLZ8 1057 aaPredicted RBP21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 CATSPER3Q86XQ3 398 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 SCFD1Q8WVM8 642 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 GMCL1Q96IK5 515 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 IFIH1Q9BYX4 1025 aaKnown RBP21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 SUGCTQ9HAC7 445 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 ZCCHC17Q9NP64 241 aaKnown RBP21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 PCDHA13Q9Y5I0 950 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 FAM86B1E9PN63 330 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 H0YIN7 160 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 LCA5LO95447 670 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 FAM86B2P0C5J1 330 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 CHRNA5P30532 468 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 FBXO11Q86XK2 927 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 SECISBP2LQ93073 1101 aaKnown RBP21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 CAPZA3Q96KX2 299 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 KCTD10Q9H3F6 313 aa21.63■■□□□ 1.05
CDC42EP1-201ENST00000249014 MYH10P35580 1976 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 GH2P01242 217 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 PSMC6P62333 389 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 CCDC40Q4G0X9 1142 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 SYDE2Q5VT97 1194 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 STYK1Q6J9G0 422 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 TSGA10Q9BZW7 698 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 L1RE1Q9UN81 338 aa21.62■■□□□ 1.05
CDC42EP1-201ENST00000249014 FRMD3A2A2Y4 597 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 OPLAHO14841 1288 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 ZNF185O15231 689 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 IKQ13123 557 aaPredicted RBP21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 PDXDC1Q6P996 788 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 NEK11Q8NG66 645 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 PRMT6Q96LA8 375 aaPredicted RBP21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 CAPN6Q9Y6Q1 641 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 ATRNL1Q5VV63 1379 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 A0A1W2PRG0 241 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 ANO9A1A5B4 782 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 SLC26A4O43511 780 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 Q4G0T1 1027 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 CEP63Q96MT8 703 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 SH2D4AQ9H788 454 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 EMILIN3Q9NT22 766 aa21.61■■□□□ 1.05
CDC42EP1-201ENST00000249014 MEIS1O00470 390 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 ERLIN1O75477 346 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 NOL4O94818 638 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 SPATA31C1P0DKV0 1188 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 SREBF1P36956 1147 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 MMP14P50281 582 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 HAUS3Q68CZ6 603 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 DEF6Q9H4E7 631 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 MLXIPQ9HAP2 919 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 ATAD5Q96QE3 1844 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 SPDYE3A6NKU9 549 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 AKR1B10O60218 316 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 BMP3P12645 472 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 HOXA13P31271 388 aaPredicted RBP21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 CASP5P51878 434 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 ASTE1Q2TB18 679 aaPredicted RBP21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 HGSNATQ68CP4 663 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 CACNA2D4Q7Z3S7 1137 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 TRIM59Q8IWR1 403 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 ZHX3Q9H4I2 956 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 NLRC4Q9NPP4 1024 aa21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 RNF216Q9NWF9 866 aaPredicted RBP21.6■■□□□ 1.05
CDC42EP1-201ENST00000249014 PITPNM2Q9BZ72 1349 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 H3BQF6 201 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 PDE2AO00408 941 aaPredicted RBP21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 TBX3O15119 743 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 USO1O60763 962 aaKnown RBP21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 KRT18P05783 430 aaKnown RBP21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 USP14P54578 494 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 MARSP56192 900 aaKnown RBP21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 RBM26Q5T8P6 1007 aaKnown RBP21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 WDR93Q6P2C0 686 aa21.59■■□□□ 1.05
CDC42EP1-201ENST00000249014 HDXQ7Z353 690 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms