RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 CYP11B2P19099 503 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 SNAP25P60880 206 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 HAUS3Q68CZ6 603 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 CCDC84Q86UT8 332 aaPredicted RBP24.29■■□□□ 1.48
RNF39-201ENST00000244360 EHBP1Q8NDI1 1231 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 MYO6Q9UM54 1294 aa24.29■■□□□ 1.48
RNF39-201ENST00000244360 PSD3Q9NYI0 1048 aa24.28■■□□□ 1.48
RNF39-201ENST00000244360 TRIM10Q9UDY6 481 aa24.28■■□□□ 1.48
RNF39-201ENST00000244360 PITPNM2Q9BZ72 1349 aa24.28■■□□□ 1.48
RNF39-201ENST00000244360 STAT3P40763 770 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 SLC12A3P55017 1021 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 GPBP1Q86WP2 473 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 FAM20AQ96MK3 541 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 PLAGL2Q9UPG8 496 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 SPDYE2BA6NHP3 402 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 SPDYE3A6NKU9 549 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 PIK3CDO00329 1044 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 SPDYE6P0CI01 402 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 FKBP3Q00688 224 aaKnown RBP24.27■■□□□ 1.48
RNF39-201ENST00000244360 GRIPAP1Q4V328 841 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 PRR16Q569H4 304 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 CEP63Q96MT8 703 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 GUCA1BQ9UMX6 200 aa24.27■■□□□ 1.48
RNF39-201ENST00000244360 SSBP05455 408 aaKnown RBP eCLIP24.26■■□□□ 1.47
RNF39-201ENST00000244360 IKQ13123 557 aaPredicted RBP24.26■■□□□ 1.47
RNF39-201ENST00000244360 USH1GQ495M9 461 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 EXOC4Q96A65 974 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 PNKPQ96T60 521 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 STK24Q9Y6E0 443 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 CYP3A4P08684 503 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 ZC3H3Q8IXZ2 948 aaKnown RBP24.26■■□□□ 1.47
RNF39-201ENST00000244360 FGFBP2Q9BYJ0 223 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 TMOD2Q9NZR1 351 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 PRR12Q9ULL5 1215 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 COL4A3BPQ9Y5P4 624 aa24.26■■□□□ 1.47
RNF39-201ENST00000244360 FAM86B1E9PN63 330 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 EPHB6O15197 1021 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 FAM86B2P0C5J1 330 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 ARSHQ5FYA8 562 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 CCDC122Q5T0U0 273 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 RSBN1LQ6PCB5 846 aaPredicted RBP24.25■■□□□ 1.47
RNF39-201ENST00000244360 ARHGAP27Q6ZUM4 889 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 ERMNQ8TAM6 284 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 UIMC1Q96RL1 719 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 GMLQ99445 158 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 EDEM3Q9BZQ6 932 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.25■■□□□ 1.47
RNF39-201ENST00000244360 MCM3P25205 808 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 RPA1P27694 616 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 MARSP56192 900 aaKnown RBP24.25■■□□□ 1.47
RNF39-201ENST00000244360 CATSPER3Q86XQ3 398 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 JAKMIP2Q96AA8 810 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 PURBQ96QR8 312 aaKnown RBP24.25■■□□□ 1.47
RNF39-201ENST00000244360 L1RE1Q9UN81 338 aa24.25■■□□□ 1.47
RNF39-201ENST00000244360 POTEFA5A3E0 1075 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 C21orf2O43822 256 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 POTEIP0CG38 1075 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 SPATA31C1P0DKV0 1188 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 RXRBP28702 533 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 WDR93Q6P2C0 686 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 POTEGQ6S5H5 508 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 POTEEQ6S8J3 1075 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 TRAPPC11Q7Z392 1133 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 KIAA1328Q86T90 577 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 KCTD10Q9H3F6 313 aa24.24■■□□□ 1.47
RNF39-201ENST00000244360 NPHP3-ACAD11A0A0J9YXS1 232 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 KRT86O43790 486 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 IPO7O95373 1038 aaKnown RBP24.23■■□□□ 1.47
RNF39-201ENST00000244360 SCFD1Q8WVM8 642 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 FAM151AQ8WW52 585 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 RPGRIP1Q96KN7 1286 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 ACBD3Q9H3P7 528 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 ARHGEF10LQ9HCE6 1279 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 FAM207AQ9NSI2 230 aaPredicted RBP24.23■■□□□ 1.47
RNF39-201ENST00000244360 VAV3Q9UKW4 847 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 TMX2Q9Y320 296 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 RCCD1A6NED2 376 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 GNA14O95837 355 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 TRAF1Q13077 416 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 BAP1Q92560 729 aa24.23■■□□□ 1.47
RNF39-201ENST00000244360 TRAF5O00463 557 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 MSH4O15457 936 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 VIL1P09327 827 aaKnown RBP24.22■■□□□ 1.47
RNF39-201ENST00000244360 STAT2P52630 851 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 HERC4Q5GLZ8 1057 aaPredicted RBP24.22■■□□□ 1.47
RNF39-201ENST00000244360 PSMD1Q99460 953 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 LACRTQ9GZZ8 138 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 ABCB6Q9NP58 842 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 STK32BQ9NY57 414 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 ZNF70Q9UC06 446 aaPredicted RBP24.22■■□□□ 1.47
RNF39-201ENST00000244360 CNTNAP1P78357 1384 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 TCP10L2B9ZVM9 353 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 LCA5LO95447 670 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 TAL1P17542 331 aaPredicted RBP24.22■■□□□ 1.47
RNF39-201ENST00000244360 ECE1P42892 770 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 VAV2P52735 878 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 KIAA1755Q5JYT7 1200 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 NCAPH2Q6IBW4 605 aa24.22■■□□□ 1.47
RNF39-201ENST00000244360 SYT2Q8N9I0 419 aaPredicted RBP24.22■■□□□ 1.47
RNF39-201ENST00000244360 MMRN2Q9H8L6 949 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms