RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 ATP11AP98196 1134 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 KRT5P13647 590 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 STAT2P52630 851 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 EZH2Q15910 746 aaKnown RBP11.99□□□□□ -0.49
COPA-201ENST00000241704 PFKFB3Q16875 520 aaPredicted RBP11.99□□□□□ -0.49
COPA-201ENST00000241704 SLC9C1Q4G0N8 1177 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 KRT19P08727 400 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 PCK1P35558 622 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 IGBP1P78318 339 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 SLC15A2Q16348 729 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 SLC44A5Q8NCS7 719 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 FBF1Q8TES7 1133 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 RIN2Q8WYP3 895 aaPredicted RBP11.99□□□□□ -0.49
COPA-201ENST00000241704 PSMD1Q99460 953 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 ADPGKQ9BRR6 497 aa11.99□□□□□ -0.49
COPA-201ENST00000241704 LRRIQ3A6PVS8 624 aaPredicted RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 CLTAP09496 248 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 PAX7P23759 505 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 SYDE2Q5VT97 1194 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 FBXO33Q7Z6M2 555 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 IL17RAQ96F46 866 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 IWS1Q96ST2 819 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 TEKT3Q9BXF9 490 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 PCDHB13Q9Y5F0 798 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 SALL3Q9BXA9 1300 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 TARSL2A2RTX5 802 aaKnown RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 GH2P01242 217 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 MYL1P05976 194 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 LARP4BQ92615 738 aaKnown RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 NACA2Q9H009 215 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 NRBP2Q9NSY0 501 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 PANK4Q9NVE7 773 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 EPN1Q9Y6I3 576 aaPredicted RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 PTPREP23469 700 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 RWDD2BP57060 319 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 CAPRIN2Q6IMN6 1127 aaKnown RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 APOBEC3FQ8IUX4 373 aaKnown RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 CCDC63Q8NA47 563 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 ENOX1Q8TC92 643 aaKnown RBP11.98□□□□□ -0.49
COPA-201ENST00000241704 COL4A3BPQ9Y5P4 624 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 ZHX2Q9Y6X8 837 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 NMT2O60551 498 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 SMIM24O75264 130 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 NR1D1P20393 614 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 C12orf60Q5U649 245 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 EGFL6Q8IUX8 553 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
COPA-201ENST00000241704 CCDC38Q502W7 563 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 WDR93Q6P2C0 686 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 ENGASEQ8NFI3 743 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 OR8K1Q8NGG5 319 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 SLC39A2Q9NP94 309 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 ASIC2Q16515 512 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 FAM160B1Q5W0V3 765 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 EEPD1Q7L9B9 569 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 CCHCR1Q8TD31 782 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 NOX5Q96PH1 765 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 WDR70Q9NW82 654 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.97□□□□□ -0.495e-6■■■■■ 31.8
COPA-201ENST00000241704 ATP6V0A2Q9Y487 856 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 UBXN2AP68543 259 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 MXRA7P84157 204 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 PLCB4Q15147 1175 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 FAM102BQ5T8I3 360 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 NEDD1Q8NHV4 660 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 UBXN6Q9BZV1 441 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 IFT172Q9UG01 1749 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 LRRD1A4D1F6 860 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 CD19P15391 556 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 TNFAIP3P21580 790 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 CDC37Q16543 378 aaPredicted RBP11.97□□□□□ -0.49
COPA-201ENST00000241704 HIBCHQ6NVY1 386 aaPredicted RBP11.97□□□□□ -0.49
COPA-201ENST00000241704 EMBQ6PCB8 327 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 SEPT14Q6ZU15 432 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 HINFPQ9BQA5 517 aa11.97□□□□□ -0.49
COPA-201ENST00000241704 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
COPA-201ENST00000241704 TNNC1P63316 161 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 GRM4Q14833 912 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 SBK1Q52WX2 424 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 SLC10A5Q5PT55 438 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 RSPH3Q86UC2 560 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 FAM160B2Q86V87 743 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 RNF34Q969K3 372 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 FAM193BQ96PV7 902 aaPredicted RBP11.96□□□□□ -0.49
COPA-201ENST00000241704 FAM207AQ9NSI2 230 aaPredicted RBP11.96□□□□□ -0.49
COPA-201ENST00000241704 SSX2IPQ9Y2D8 614 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 USP17L5A8MUK1 530 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 CDC25AP30304 524 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 MAGEA1P43355 309 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 CASP7P55210 303 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 MTF1Q14872 753 aa11.96□□□□□ -0.49
COPA-201ENST00000241704 RESP18Q5W5W9 173 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms