RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ANO6Q4KMQ2 910 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 IGSF22Q8N9C0 903 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 CRYGNQ8WXF5 182 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 ANO3Q9BYT9 981 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 LRRC27Q9C0I9 530 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 ZNF214Q9UL59 606 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-201ENST00000238688 PPP1R9AQ9ULJ8 1098 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 IVNS1ABPQ9Y6Y0 642 aa14.86□□□□□ -0.03
SLIRP-201ENST00000238688 SMTNL1A8MU46 457 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 GOLGA6L19H0YKK7 550 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 GCOM1H8Y6P7 765 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-201ENST00000238688 VWA5AO00534 786 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 IKBKBO14920 756 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 POLR2MP0CAP2 368 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 CYBAP13498 195 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 E2F4Q16254 413 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 LONRF3Q496Y0 759 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 Q4G0T1 1027 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 TPRNQ4KMQ1 711 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 OLFML2BQ68BL8 750 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 SH3RF1Q7Z6J0 888 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 MLKLQ8NB16 471 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 FAM20AQ96MK3 541 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 MROH8Q9H579 483 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 SLC38A10Q9HBR0 1119 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 DISC1Q9NRI5 854 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 RMND1Q9NWS8 449 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 STK17AQ9UEE5 414 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 KDM3AQ9Y4C1 1321 aa14.85□□□□□ -0.03
SLIRP-201ENST00000238688 WNT7AO00755 349 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 ATP2A1O14983 1001 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 EVI5O60447 810 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 PPP1R2P41236 205 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 SARSP49591 514 aaKnown RBP14.84□□□□□ -0.03
SLIRP-201ENST00000238688 AMPD3Q01432 767 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 PLS1Q14651 629 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 TKFCQ3LXA3 575 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 MFSD14CQ5VZR4 134 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
SLIRP-201ENST00000238688 NCAPG2Q86XI2 1143 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 ABRAQ8N0Z2 381 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 SMARCE1Q969G3 411 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 CALML4Q96GE6 196 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 C11orf49Q9H6J7 331 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 DDX25Q9UHL0 483 aaKnown RBP14.84□□□□□ -0.03
SLIRP-201ENST00000238688 NR2E3Q9Y5X4 410 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 SZT2Q5T011 3432 aa14.84□□□□□ -0.03
SLIRP-201ENST00000238688 BECN2A8MW95 431 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 ZBED4O75132 1171 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 ARHGAP4P98171 946 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 SETQ01105 290 aaPredicted RBP14.83□□□□□ -0.04
SLIRP-201ENST00000238688 GRIN1Q05586 938 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 DHX8Q14562 1220 aaKnown RBP14.83□□□□□ -0.04
SLIRP-201ENST00000238688 SARM1Q6SZW1 724 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 DPP9Q86TI2 863 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 KIFC2Q96AC6 838 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 EPSTI1Q96J88 318 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 NT5C3AQ9H0P0 336 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 CBX8Q9HC52 389 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 KCNMB3Q9NPA1 279 aa14.83□□□□□ -0.04
SLIRP-201ENST00000238688 DDX20Q9UHI6 824 aaKnown RBP14.83□□□□□ -0.04
SLIRP-201ENST00000238688 GTPBP6O43824 516 aaPredicted RBP14.82□□□□□ -0.04
SLIRP-201ENST00000238688 SLC25A27O95847 323 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 TPM3P06753 285 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 STAT3P40763 770 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 STAT6P42226 847 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 HSD17B4P51659 736 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 RRAGBQ5VZM2 374 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 XRRA1Q6P2D8 792 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 PDXDC2PQ6P474 469 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 NIPA1Q7RTP0 329 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.82□□□□□ -0.04
SLIRP-201ENST00000238688 RNF214Q8ND24 703 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 CCDC47Q96A33 483 aaKnown RBP14.82□□□□□ -0.04
SLIRP-201ENST00000238688 MAML3Q96JK9 1138 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 DNAJC25Q9H1X3 360 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 TMEM60Q9H2L4 133 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 PCDH10Q9P2E7 1040 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 SERTAD1Q9UHV2 236 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 RIPK3Q9Y572 518 aa14.82□□□□□ -0.04
SLIRP-201ENST00000238688 CTDP1Q9Y5B0 961 aaPredicted RBP14.82□□□□□ -0.04
SLIRP-201ENST00000238688 ADAMTS3O15072 1205 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 PGK2P07205 417 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 MUTP22033 750 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 ERCC5P28715 1186 aaPredicted RBP14.81□□□□□ -0.04
SLIRP-201ENST00000238688 IQCB1Q15051 598 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 IL17AQ16552 155 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 UBE2SQ16763 222 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 ZNF792Q3KQV3 632 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 USH1GQ495M9 461 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 HYIQ5T013 277 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 KRT79Q5XKE5 535 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 HAUS3Q68CZ6 603 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 CNNM4Q6P4Q7 775 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 CABP7Q86V35 215 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 ERMNQ8TAM6 284 aa14.81□□□□□ -0.04
SLIRP-201ENST00000238688 DHX58Q96C10 678 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms