RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 CLIC6Q96NY7 704 aa11.05□□□□□ -0.64
TTC1-201ENST00000231238 GOLPH3LQ9H4A5 285 aa11.05□□□□□ -0.64
TTC1-201ENST00000231238 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
TTC1-201ENST00000231238 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
TTC1-201ENST00000231238 FZD1Q9UP38 647 aa11.05□□□□□ -0.64
TTC1-201ENST00000231238 SRPRBQ9Y5M8 271 aaKnown RBP11.05□□□□□ -0.64
TTC1-201ENST00000231238 VWA3AA6NCI4 1184 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 SPDYE3A6NKU9 549 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 PPP1R11O60927 126 aaPredicted RBP11.04□□□□□ -0.64
TTC1-201ENST00000231238 PTPRAP18433 802 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 SOX11P35716 441 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 MRE11P49959 708 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 RNF135Q8IUD6 432 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 CKAP2LQ8IYA6 745 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 PRPF38AQ8NAV1 312 aaKnown RBP11.04□□□□□ -0.64
TTC1-201ENST00000231238 TBCKQ8TEA7 893 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 KLRG1Q96E93 195 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 NAP1L4Q99733 375 aaKnown RBP11.04□□□□□ -0.64
TTC1-201ENST00000231238 SLF1Q9BQI6 1058 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 WDR18Q9BV38 432 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 TMEM260Q9NX78 707 aa11.04□□□□□ -0.64
TTC1-201ENST00000231238 MRPL11Q9Y3B7 192 aaKnown RBP11.04□□□□□ -0.64
TTC1-201ENST00000231238 C19orf81C9J6K1 198 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 NEMFO60524 1076 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 PLA2G6O60733 806 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 ZBED4O75132 1171 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 ZNF202O95125 648 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 VEGFBP49765 207 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 BACE1P56817 501 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 KIAA1755Q5JYT7 1200 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 AXDND1Q5T1B0 1012 aaPredicted RBP11.03□□□□□ -0.64
TTC1-201ENST00000231238 RESP18Q5W5W9 173 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 DTHD1Q6ZMT9 781 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 ADAMTS19Q8TE59 1207 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 CDCA5Q96FF9 252 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 CSRNP2Q9H175 543 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 TAF1DQ9H5J8 278 aaPredicted RBP11.03□□□□□ -0.64
TTC1-201ENST00000231238 RPAP3Q9H6T3 665 aaPredicted RBP11.03□□□□□ -0.64
TTC1-201ENST00000231238 EHMT1Q9H9B1 1298 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 GRPEL1Q9HAV7 217 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 FBXO28Q9NVF7 368 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 FBXO2Q9UK22 296 aaPredicted RBP11.03□□□□□ -0.64
TTC1-201ENST00000231238 KCNH3Q9ULD8 1083 aa11.03□□□□□ -0.64
TTC1-201ENST00000231238 M0R2N6 131 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 PIK3CDO00329 1044 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 LAD1O00515 517 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 CFBP00751 764 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 FOSP01100 380 aaPredicted RBP11.02□□□□□ -0.65
TTC1-201ENST00000231238 VCAM1P19320 739 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 HMGCS2P54868 508 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 ATP2C1P98194 919 aaPredicted RBP11.02□□□□□ -0.65
TTC1-201ENST00000231238 AP3B2Q13367 1082 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 NOL9Q5SY16 702 aaKnown RBP11.02□□□□□ -0.65
TTC1-201ENST00000231238 ARL6IP4Q66PJ3 421 aaKnown RBP11.02□□□□□ -0.65
TTC1-201ENST00000231238 SHC4Q6S5L8 630 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 ARMC9Q7Z3E5 817 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 FMR1NBQ8N0W7 255 aaPredicted RBP11.02□□□□□ -0.65
TTC1-201ENST00000231238 CPXCR1Q8N123 301 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 CNNM3Q8NE01 707 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 PNMA2Q9UL42 364 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 CCPG1Q9ULG6 757 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 MRVI1Q9Y6F6 885 aa11.02□□□□□ -0.65
TTC1-201ENST00000231238 ABCB11O95342 1321 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP2O75604 605 aaPredicted RBP11.01□□□□□ -0.65
TTC1-201ENST00000231238 WFS1O76024 890 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 OR52Z1P0C646 297 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 ZNF76P36508 570 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 ORC2Q13416 577 aaPredicted RBP11.01□□□□□ -0.65
TTC1-201ENST00000231238 VGLL4Q14135 290 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 TMEM266Q2M3C6 531 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 USP17L6PQ6QN14 398 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 CEP57L1Q8IYX8 460 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 PDILTQ8N807 584 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.01□□□□□ -0.651e-6■■■□□ 17
TTC1-201ENST00000231238 RNF217Q8TC41 542 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
TTC1-201ENST00000231238 PANK2Q9BZ23 570 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 RAB34Q9BZG1 259 aa11.01□□□□□ -0.65
TTC1-201ENST00000231238 RANBP17Q9H2T7 1088 aaKnown RBP11.01□□□□□ -0.65
TTC1-201ENST00000231238 POLMQ9NP87 494 aaPredicted RBP11.01□□□□□ -0.65
TTC1-201ENST00000231238 A0A1W2PRU2 124 aa11□□□□□ -0.65
TTC1-201ENST00000231238 GCOM1H8Y6P7 765 aaPredicted RBP11□□□□□ -0.65
TTC1-201ENST00000231238 POLR2DO15514 142 aaKnown RBP11□□□□□ -0.65
TTC1-201ENST00000231238 POLR2MP0CAP2 368 aa11□□□□□ -0.65
TTC1-201ENST00000231238 GCFC2P16383 781 aaKnown RBP11□□□□□ -0.65
TTC1-201ENST00000231238 LONP1P36776 959 aaKnown RBP11□□□□□ -0.65
TTC1-201ENST00000231238 SNW1Q13573 536 aaKnown RBP11□□□□□ -0.65
TTC1-201ENST00000231238 CALCRLQ16602 461 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms