RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 MARCH6O60337 910 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 SLC8A3P57103 927 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 IFFO1Q0D2I5 559 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 PLCB4Q15147 1175 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 QPCTQ16769 361 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 ZNF513Q8N8E2 541 aaPredicted RBP15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 SEC16BQ96JE7 1060 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 STK38LQ9Y2H1 464 aa15.52■□□□□ 0.07
PCDHB3-201ENST00000231130 ATP6V1G2O95670 118 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 TRAF1Q13077 416 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 GKAP1Q5VSY0 366 aaPredicted RBP15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 KDM7AQ6ZMT4 941 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 ARFGAP2Q8N6H7 521 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 C3orf20Q8ND61 904 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 KCNV2Q8TDN2 545 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 HOOK2Q96ED9 719 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 ATP6V1G3Q96LB4 118 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 PRDX5P30044 214 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 CCDC152Q4G0S7 254 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 NBPF5PQ86XG9 351 aaPredicted RBP15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 IQCKQ8N0W5 287 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 TATDN2Q93075 761 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 CALML4Q96GE6 196 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 DPH5Q9H2P9 285 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 TJP1Q07157 1748 aa15.51■□□□□ 0.07
PCDHB3-201ENST00000231130 TLDC2A0PJX2 215 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 GCOM1H8Y6P7 765 aaPredicted RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 MYZAPP0CAP1 466 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 RCAN1P53805 252 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 CAVIN4Q5BKX8 364 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 ERGIC2Q96RQ1 377 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 DDX47Q9H0S4 455 aaKnown RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 GGT7Q9UJ14 662 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 NOVA2Q9UNW9 492 aaKnown RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 KLRK1P26718 216 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 EPS15P42566 896 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 CNNM4Q6P4Q7 775 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 UHMK1Q8TAS1 419 aaKnown RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 LSM14BQ9BX40 385 aaKnown RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 LEMD3Q9Y2U8 911 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 POTEMA6NI47 508 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 PECAM1P16284 738 aaPredicted RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 PRPF4BQ13523 1007 aaKnown RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 TLDC1Q6P9B6 456 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 SLC30A9Q6PML9 568 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 SMIM5Q71RC9 77 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 SV2BQ7L1I2 683 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 DCP1AQ9NPI6 582 aaPredicted RBP15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 BATF3Q9NR55 127 aa15.5■□□□□ 0.07
PCDHB3-201ENST00000231130 OR52Z1P0C646 297 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 NBPF9Q3BBW0 867 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 SLC9C1Q4G0N8 1177 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 MDM1Q8TC05 714 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 RPS6KA3P51812 740 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 ELF3P78545 371 aaPredicted RBP15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 CHADLQ6NUI6 762 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 TSC22D3Q99576 134 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 PAIP2Q9BPZ3 127 aaKnown RBP15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 BAZ2AQ9UIF9 1905 aaKnown RBP15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 NEFHP12036 1026 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 AMPD3Q01432 767 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 DRP2Q13474 957 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 MAN2A1Q16706 1144 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 SFMBT2Q5VUG0 894 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 ZNF384Q8TF68 577 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 TMEM260Q9NX78 707 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 SIK3Q9Y2K2 1263 aa15.49■□□□□ 0.07
PCDHB3-201ENST00000231130 NID2Q14112 1375 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 A0A087X0T9 212 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 MYMKA6NI61 221 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 DCDC2CA8MYV0 355 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 LGR5O75473 907 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 FAM228BP0C875 321 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 TSPY3P0CV98 308 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 TSPY8P0CW00 308 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 MECOMQ03112 1051 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 CCDC84Q86UT8 332 aaPredicted RBP15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 CAVIN3Q969G5 261 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 CRNKL1Q9BZJ0 848 aaKnown RBP15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 UBA5Q9GZZ9 404 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 LAMB4A4D0S4 1761 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 SMCO2A6NFE2 343 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 PYGLP06737 847 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 KLHL30Q0D2K2 578 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 CNKSR2Q8WXI2 1034 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 C15orf41Q9Y2V0 281 aa15.48■□□□□ 0.07
PCDHB3-201ENST00000231130 PKD1L3Q7Z443 1732 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 FLT3P36888 993 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 KRT71Q3SY84 523 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 FAM83BQ5T0W9 1011 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 TBCKQ8TEA7 893 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 ACSBG1Q96GR2 724 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 CCDC113Q9H0I3 377 aa15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 NOP53Q9NZM5 478 aaKnown RBP15.47■□□□□ 0.07
PCDHB3-201ENST00000231130 CYTH3O43739 400 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms